Clone BS32228 Report

Search the DGRC for BS32228

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:322
Well:28
Vector:pDNR-Dual
Associated Gene/TranscriptCG13996-RA
Protein status:BS32228.pep: full length peptide match
Sequenced Size:803

Clone Sequence Records

BS32228.complete Sequence

803 bp assembled on 2013-04-19

GenBank Submission: KX806099

> BS32228.complete
GAAGTTATCAGTCGACATGGAGTCGTTCTCAGCGTCCAGGTGCTCCACCA
TACCGTCACCACTGCCGCACAGTGCCAGTGGCATGGACAGTCCGGATATC
TGTGAGCCGCCGCAGGATGAGCAGGAGTTCTGCTTTCGCTATCCCAGCTA
CATGTTTCCGGACGTGGAGTACGACAAGGAGGATGTGCCGCTACCCTTCA
AGGCCTCGCCGGACTCGCTCTTCAATCTCTGCGCCGCCGTCGTGGATTCC
CAAGCCCGCACTGAGGTCTTCAAGTGGAGCATCAACGATGTGACCGACTG
GCTGCGCAACTTTGGTTATCCCGAGTACGAGCAAACTTTTCGGGAGAACT
ACATTGATGGACACAAGCTGCTGAATCTGGACGCAGTTGCTCTGGTTGCG
CTCAACGTTCGCAACTTCGAGCACATCCGCCACCTGGGCCGCGGCATACG
AGCGCTTTACAGGAAGGAGCTGCAAACGGCGACGGAGACCAAGCAGCAGA
GTGAGGTCTATAAGACATTCCGGGCCCGCACTGGCCGAAGGTACGAGGGA
TTGCGGGAGACGGAGCTACTGGGCCGCATGCACATGATTCGCTCCGTTTT
CCGCGACGTCAACGACTGGGATCTGATGGAGCTGCACATGTCCAGGGCGC
CGGTGAGGCGGTATCGCGAGATCGTCGCTGGCTCCAGACGCTACAACCTC
TATGGCCCATCGACAGCGCGCCGGGAACCCATCATTACGGACGATGTGGA
TGCCACACCGTGGTACAACTTCGAGGATTGCTACTGAAAGCTTTCTAGAC
CAT

BS32228.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:17:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG13996-RA 771 CG13996-PA 1..771 17..787 3855 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:17:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG13996-RA 832 CG13996-RA 16..786 17..787 3855 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:17:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6021215..6021672 330..787 2290 100 Plus
2L 23513712 2L 6020850..6021164 17..331 1575 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:17:43 has no hits.

BS32228.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 16:58:55 Download gff for BS32228.complete
Subject Subject Range Query Range Percent Splice Strand
CG13996-RA 1..770 17..786 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:02:43 Download gff for BS32228.complete
Subject Subject Range Query Range Percent Splice Strand
CG13996-RA 16..785 17..786 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:25:29 Download gff for BS32228.complete
Subject Subject Range Query Range Percent Splice Strand
CG13996-RA 16..785 17..786 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:25:29 Download gff for BS32228.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6020850..6021164 17..331 100 -> Plus
2L 6021217..6021671 332..786 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:02:43 Download gff for BS32228.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6020850..6021164 17..331 100 -> Plus
arm_2L 6021217..6021671 332..786 100   Plus

BS32228.pep Sequence

Translation from 16 to 786

> BS32228.pep
MESFSASRCSTIPSPLPHSASGMDSPDICEPPQDEQEFCFRYPSYMFPDV
EYDKEDVPLPFKASPDSLFNLCAAVVDSQARTEVFKWSINDVTDWLRNFG
YPEYEQTFRENYIDGHKLLNLDAVALVALNVRNFEHIRHLGRGIRALYRK
ELQTATETKQQSEVYKTFRARTGRRYEGLRETELLGRMHMIRSVFRDVND
WDLMELHMSRAPVRRYREIVAGSRRYNLYGPSTARREPIITDDVDATPWY
NFEDCY*

BS32228.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:12:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG13996-PA 256 CG13996-PA 1..256 1..256 1376 100 Plus
CG15625-PA 349 CG15625-PA 43..242 51..245 389 37 Plus