Clone BS32248 Report

Search the DGRC for BS32248

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:322
Well:48
Vector:pDNR-Dual
Associated Gene/TranscriptCG15545-RA
Protein status:BS32248.pep: full length peptide match
Sequenced Size:1109

Clone Sequence Records

BS32248.complete Sequence

1109 bp assembled on 2013-04-19

GenBank Submission: KX804998

> BS32248.complete
GAAGTTATCAGTCGACATGAAAGTGTGCTGGAATTTCTTTGCTGCGGCGG
TGCTGTTAGTGACGGTCACCTCGGGGCTGAGACCCCCACGATCCTACTAT
CGGAGGAGCTACTTCAGTGCAGTGGGTTCAGGATCTGGGCACGCACCCAG
CTCTCTGCCAGGACCAGTGAGAATAGGACCCGCTAGTTACTTCCGTGCCG
ATCTGCAAACAAATGAGAGCAAGCACCGGCCACTGAGCAAAAAGTATCCC
AAGAAGAGCCACTACAGACCCTACGGATCGCAAGAGGAAGAGGACGAACA
ACGCTACAATTCCGCGGAATATTCAGGAGAGTCCTCCGTTCAGGATAGTC
GGGAATACACGATTGGCACCCAAATTCGCGTCCAGCATCCCATAACCGTG
CCCAAGAAGTCCAGTTCCGGCTACCAGAAGCAGCCAAAATATGTGACGGC
CATTCCATACAAGGCATCTGGTTATGGATCCGATATCCACAAGCCCTCCG
GTTATGGATCCGATGTTCATATTGGATCTGGAGAGGATGTTGGACCTCCT
CCGAAAAGATCGAAGTGGACCCCAGTGCAATACGAATCGGAAGCCGATCC
CTTCCATCTAGTGCCACCTCCAAAGGCAACCGTCGCCTCCAGCAGCAACT
CATATAGTGTTTATGAGCCCGAACACGATGACTACGAGGTGGTTCCAGTG
CCCCGACCAAAAAGCCACGATCGCTACAAAAGCGTCGCCTCCAAGAAACA
AGTAGAGGCCTACCTAGAGGATCAGCAGAAGCTGCTCGACGAGGCCATCA
AAGTTCAGCTTTTGAACAATCCGAAGCTGCAAAAATTCTTCAAGGCCCAG
GCGCAGGAACAGGAGCGGGAATCGCGGCCAGACCTCGAAATCGAGGATTT
TGAGGCCTATCCGCCCAACTTTTCGGGGCCCGGACACCTGCGCAACAAGT
ACATCGAACACCCACCATCTTCTCCGCCGAAGGGATCTCGATCACGCCGG
CGTCCTCCAAGTGGAGATCTTAACCGACCACCCAAGACCATCATCAAACC
GAAAAGGAAATACCGATCCACAGCACTGGTCATCAATGTGTGAAAGCTTT
CTAGACCAT

BS32248.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:17:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG15545-RA 1077 CG15545-PA 1..1077 17..1093 5385 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:17:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG15545-RA 1267 CG15545-RA 72..1148 17..1093 5385 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:17:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30871058..30871871 1093..280 4070 100 Minus
3R 32079331 3R 30871954..30872199 280..35 1230 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:17:47 has no hits.

BS32248.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 16:59:40 Download gff for BS32248.complete
Subject Subject Range Query Range Percent Splice Strand
CG15545-RA 1..1076 17..1092 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:02:45 Download gff for BS32248.complete
Subject Subject Range Query Range Percent Splice Strand
CG15545-RA 72..1147 17..1092 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:25:31 Download gff for BS32248.complete
Subject Subject Range Query Range Percent Splice Strand
CG15545-RA 72..1147 17..1092 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:25:31 Download gff for BS32248.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30871059..30871870 281..1092 100 <- Minus
3R 30871954..30872199 35..280 100 <- Minus
3R 30872263..30872280 17..34 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:02:45 Download gff for BS32248.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26696781..26697592 281..1092 100 <- Minus
arm_3R 26697676..26697921 35..280 100 <- Minus
arm_3R 26697985..26698002 17..34 100   Minus

BS32248.pep Sequence

Translation from 16 to 1092

> BS32248.pep
MKVCWNFFAAAVLLVTVTSGLRPPRSYYRRSYFSAVGSGSGHAPSSLPGP
VRIGPASYFRADLQTNESKHRPLSKKYPKKSHYRPYGSQEEEDEQRYNSA
EYSGESSVQDSREYTIGTQIRVQHPITVPKKSSSGYQKQPKYVTAIPYKA
SGYGSDIHKPSGYGSDVHIGSGEDVGPPPKRSKWTPVQYESEADPFHLVP
PPKATVASSSNSYSVYEPEHDDYEVVPVPRPKSHDRYKSVASKKQVEAYL
EDQQKLLDEAIKVQLLNNPKLQKFFKAQAQEQERESRPDLEIEDFEAYPP
NFSGPGHLRNKYIEHPPSSPPKGSRSRRRPPSGDLNRPPKTIIKPKRKYR
STALVINV*

BS32248.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:12:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG15545-PA 358 CG15545-PA 1..358 1..358 1904 100 Plus