Clone BS32285 Report

Search the DGRC for BS32285

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:322
Well:85
Vector:pDNR-Dual
Associated Gene/TranscriptTotZ-RA
Protein status:BS32285.pep: full length peptide match
Sequenced Size:476

Clone Sequence Records

BS32285.complete Sequence

476 bp assembled on 2013-04-19

GenBank Submission: KX801348

> BS32285.complete
GAAGTTATCAGTCGACATGTATTTTGCCATCCGACTAAGCTTTGTTCTGG
CAGTGCTCATCTGTCTCACAGGAAACGGAAGTGCTAGAATGCTGGATGCA
GATCGCAACCGGCTCCAGCAACTTCAGATTCGAAGTCAGCAATCTGCGGA
TGCCAACACCCAGGTGGATATTGCTTATGAAGTCATCGGAATTTATGATA
AATACAAGGGCCAGGGGGGATCGAATGTGTTGAGAGAGGCTCAATTGAAT
TCACAAGTTAATGACTTTAAAAGAAAGACTATGGTCATCGATGGAGTGCC
AGCCCAAGGAGGAGTTTGGGGTATTTTAGGAGCAATAAAGAAGGCCGCTG
ATGCCGTTCCTGACAATGTGAAGAAAGATGCTGAGAACTTGGTTAAGAGC
TCTACAAAAGTCTTAGTTCGGGGCATATACGACTATCTTATGGGTAAAAT
GAAGCACTGAAAGCTTTCTAGACCAT

BS32285.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:18:50
Subject Length Description Subject Range Query Range Score Percent Strand
TotZ-RA 444 CG31507-PA 1..444 17..460 2205 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:18:51
Subject Length Description Subject Range Query Range Score Percent Strand
TotZ-RA 573 CG31507-RA 31..476 17..462 2215 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:18:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20877842..20878266 38..462 2110 99.8 Plus
Blast to na_te.dros performed on 2014-11-28 13:18:49 has no hits.

BS32285.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:12:12 Download gff for BS32285.complete
Subject Subject Range Query Range Percent Splice Strand
TotZ-RA 31..473 17..459 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:18 Download gff for BS32285.complete
Subject Subject Range Query Range Percent Splice Strand
TotZ-RA 31..473 17..459 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:25:56 Download gff for BS32285.complete
Subject Subject Range Query Range Percent Splice Strand
TotZ-RA 31..473 17..459 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:25:56 Download gff for BS32285.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20877766..20877788 17..39 100 -> Plus
3R 20877844..20878263 40..459 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:18 Download gff for BS32285.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16703488..16703510 17..39 100 -> Plus
arm_3R 16703566..16703985 40..459 99   Plus

BS32285.pep Sequence

Translation from 16 to 459

> BS32285.pep
MYFAIRLSFVLAVLICLTGNGSARMLDADRNRLQQLQIRSQQSADANTQV
DIAYEVIGIYDKYKGQGGSNVLREAQLNSQVNDFKRKTMVIDGVPAQGGV
WGILGAIKKAADAVPDNVKKDAENLVKSSTKVLVRGIYDYLMGKMKH*

BS32285.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:13:03
Subject Length Description Subject Range Query Range Score Percent Strand
TotZ-PA 147 CG31507-PA 1..147 1..147 740 100 Plus