BS32309.complete Sequence
836 bp assembled on 2013-05-22
> BS32309.complete
GAAGTTATCAGTCGACATGACAACCAGTCCCAACGTAGCAGAAGTGGATG
ATGGCGAGCTGCCGAAACTGGAAGCGATAATCAGCGCGCTGAAATGCGAG
CAGACGGGTCACATTATGGAGGCGATACTGCTCTACGAGGAGAGCATCTT
CAAGTTGTCCCAGATGGCCGATGCGGAGCCGAGTCGCCGCCAGCTGTGTG
GGAAGTATTTGAAGATGTACGAGGCGCGGGCCAAACAGCTGAGGGATCAG
GTCAAGGGTCACTTGCACACCAGCCGTATGCTGGATCACATCACCATCGA
GCAGGGTGCCAGGGGCAGAAGCTACCAGCGGCTGTTTGGTCCGTATTTGG
ACGATGCGGTTCGGGAGGCCCATCTCAACGAGCCACACCTCACGGAGCCA
CCACACTTTAGGAATTTGCTTAATTTTTTCGAGGTGCTGGTCAAGAACTG
TCGCTATCTAAAGTATATTCGCCTCACTACGCGCCCAGATGCGACGGCGC
CCAAGAATCAGTTGCAGATGCTGCAGCAAATGCAGAGCGATCTGGCCGGT
GGCAACATCCAGATGAATTTCCAGATGGACGACAGTTTGCACGATCGCAA
GATCGTTCTTAGCTCGGGAGTGGTCATTAAGATTGGCCGTGGCCTTCACT
ACTTCGAGCCCATGGAGGGTTCGTACAGTTTGGGTCTGTGCGATTTCGAT
TTTCGCAAGTGCCTGGCCACCGAGGTGGACATCTGGAAGTGTCGTCCTTT
TGCGAGGCGCCTTAAGGATACACAGGAGGGCGAGGATCGACCGGAGGCAC
ACGGCTACTCCAGCGATTAAAAGCTTTCTAGACCAT
BS32309.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:40:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30398-RA | 804 | CG30398-PA | 1..804 | 17..820 | 3960 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:40:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30398-RA | 1029 | CG30398-RA | 128..931 | 17..820 | 3960 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:40:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21717931..21718734 | 17..820 | 3960 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:40:35 has no hits.
BS32309.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:14 Download gff for
BS32309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30398-RA | 99..900 | 17..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:11:49 Download gff for
BS32309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30398-RA | 99..900 | 17..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:32:37 Download gff for
BS32309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30398-RA | 128..929 | 17..818 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:32:37 Download gff for
BS32309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21717931..21718732 | 17..818 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:11:49 Download gff for
BS32309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17605436..17606237 | 17..818 | 99 | | Plus |
BS32309.pep Sequence
Translation from 16 to 819
> BS32309.pep
MTTSPNVAEVDDGELPKLEAIISALKCEQTGHIMEAILLYEESIFKLSQM
ADAEPSRRQLCGKYLKMYEARAKQLRDQVKGHLHTSRMLDHITIEQGARG
RSYQRLFGPYLDDAVREAHLNEPHLTEPPHFRNLLNFFEVLVKNCRYLKY
IRLTTRPDATAPKNQLQMLQQMQSDLAGGNIQMNFQMDDSLHDRKIVLSS
GVVIKIGRGLHYFEPMEGSYSLGLCDFDFRKCLATEVDIWKCRPFARRLK
DTQEGEDRPEAHGYSSD*
BS32309.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30398-PA | 267 | CG30398-PA | 1..267 | 1..267 | 1406 | 100 | Plus |
CG14985-PB | 241 | CG14985-PB | 9..235 | 19..241 | 470 | 41.4 | Plus |
CG14985-PC | 190 | CG14985-PC | 9..190 | 19..196 | 315 | 37.4 | Plus |