Clone BS32309 Report

Search the DGRC for BS32309

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:323
Well:9
Vector:pDNR-Dual
Associated Gene/TranscriptCG30398-RA
Protein status:BS32309.pep: gold
Sequenced Size:836

Clone Sequence Records

BS32309.complete Sequence

836 bp assembled on 2013-05-22

> BS32309.complete
GAAGTTATCAGTCGACATGACAACCAGTCCCAACGTAGCAGAAGTGGATG
ATGGCGAGCTGCCGAAACTGGAAGCGATAATCAGCGCGCTGAAATGCGAG
CAGACGGGTCACATTATGGAGGCGATACTGCTCTACGAGGAGAGCATCTT
CAAGTTGTCCCAGATGGCCGATGCGGAGCCGAGTCGCCGCCAGCTGTGTG
GGAAGTATTTGAAGATGTACGAGGCGCGGGCCAAACAGCTGAGGGATCAG
GTCAAGGGTCACTTGCACACCAGCCGTATGCTGGATCACATCACCATCGA
GCAGGGTGCCAGGGGCAGAAGCTACCAGCGGCTGTTTGGTCCGTATTTGG
ACGATGCGGTTCGGGAGGCCCATCTCAACGAGCCACACCTCACGGAGCCA
CCACACTTTAGGAATTTGCTTAATTTTTTCGAGGTGCTGGTCAAGAACTG
TCGCTATCTAAAGTATATTCGCCTCACTACGCGCCCAGATGCGACGGCGC
CCAAGAATCAGTTGCAGATGCTGCAGCAAATGCAGAGCGATCTGGCCGGT
GGCAACATCCAGATGAATTTCCAGATGGACGACAGTTTGCACGATCGCAA
GATCGTTCTTAGCTCGGGAGTGGTCATTAAGATTGGCCGTGGCCTTCACT
ACTTCGAGCCCATGGAGGGTTCGTACAGTTTGGGTCTGTGCGATTTCGAT
TTTCGCAAGTGCCTGGCCACCGAGGTGGACATCTGGAAGTGTCGTCCTTT
TGCGAGGCGCCTTAAGGATACACAGGAGGGCGAGGATCGACCGGAGGCAC
ACGGCTACTCCAGCGATTAAAAGCTTTCTAGACCAT

BS32309.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:40:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG30398-RA 804 CG30398-PA 1..804 17..820 3960 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:40:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG30398-RA 1029 CG30398-RA 128..931 17..820 3960 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:40:34
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21717931..21718734 17..820 3960 99.5 Plus
Blast to na_te.dros performed on 2014-11-28 13:40:35 has no hits.

BS32309.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:14 Download gff for BS32309.complete
Subject Subject Range Query Range Percent Splice Strand
CG30398-RA 99..900 17..818 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:11:49 Download gff for BS32309.complete
Subject Subject Range Query Range Percent Splice Strand
CG30398-RA 99..900 17..818 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:32:37 Download gff for BS32309.complete
Subject Subject Range Query Range Percent Splice Strand
CG30398-RA 128..929 17..818 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:32:37 Download gff for BS32309.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21717931..21718732 17..818 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:11:49 Download gff for BS32309.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17605436..17606237 17..818 99   Plus

BS32309.pep Sequence

Translation from 16 to 819

> BS32309.pep
MTTSPNVAEVDDGELPKLEAIISALKCEQTGHIMEAILLYEESIFKLSQM
ADAEPSRRQLCGKYLKMYEARAKQLRDQVKGHLHTSRMLDHITIEQGARG
RSYQRLFGPYLDDAVREAHLNEPHLTEPPHFRNLLNFFEVLVKNCRYLKY
IRLTTRPDATAPKNQLQMLQQMQSDLAGGNIQMNFQMDDSLHDRKIVLSS
GVVIKIGRGLHYFEPMEGSYSLGLCDFDFRKCLATEVDIWKCRPFARRLK
DTQEGEDRPEAHGYSSD*

BS32309.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG30398-PA 267 CG30398-PA 1..267 1..267 1406 100 Plus
CG14985-PB 241 CG14985-PB 9..235 19..241 470 41.4 Plus
CG14985-PC 190 CG14985-PC 9..190 19..196 315 37.4 Plus