BS32314.complete Sequence
623 bp assembled on 2013-05-22
> BS32314.complete
GAAGTTATCAGTCGACATGCCGACTACACCACAGGATCTTGCCCTTGCCC
ACTCTCTTGCTCAAAGACCTCCGACCGATAGCAGTGAGGCCAAGGAGCAG
GAGGCCGGCGAATCGGACAACCTGCCCAACCTGTGCACTTTGTCGCTGGA
CGAACTGAAACAGCTGGACAGGGATCCCGAGTTCTTCGAGGACTTCATCG
AGGAGATGTCCGTGGTGCAGTACCTGAACGAGGAGCTCGATTCAATGATG
GACCAGGTGGAGATTATATCAAGAGAGAACGAGTGCAAGGGCATTCATCT
GGTAGAGCTGAAGCGCCGACTCAGCGACGATTTTACAGCTTTAAAAAACC
TAGGCGAGAAATGCGACCGGCTGAACAAGAAGTACTTCAAGAAGTCGGAT
GAATACGCGCCTCAGCATATCAGGATTGCAGCTTCCAATGCCGATGGCGA
CTGCGATCGTCACGTGGAGCACTTCCTGAACGGAAAGACCGACGTGCAGA
CTTTCCTCAACACGTACCAGTGGTCGAAGAAGATCAGTACCGAGCGCAAG
GCCAAAGAGGAGCGCCTGGGCACCCAGCTCAGTGCTCTGGAGCGGGCCGG
TATCTAGAAGCTTTCTAGACCAT
BS32314.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:40:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mod(r)-RE | 591 | CG17828-PE | 1..591 | 17..607 | 2955 | 100 | Plus |
mod(r)-RD | 591 | CG17828-PD | 1..591 | 17..607 | 2955 | 100 | Plus |
mod(r)-RB | 591 | CG17828-PB | 1..591 | 17..607 | 2955 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:40:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mod(r)-RE | 1323 | CG17828-RE | 310..900 | 17..607 | 2955 | 100 | Plus |
mod(r)-RD | 1331 | CG17828-RD | 318..908 | 17..607 | 2955 | 100 | Plus |
mod(r)-RB | 1099 | CG17828-RB | 86..676 | 17..607 | 2955 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:40:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 621891..622151 | 17..277 | 1290 | 99.6 | Plus |
X | 23542271 | X | 622445..622628 | 424..607 | 920 | 100 | Plus |
X | 23542271 | X | 622207..622358 | 273..424 | 760 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:40:48 has no hits.
BS32314.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:20 Download gff for
BS32314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mod(r)-RB | 86..676 | 17..607 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:11:57 Download gff for
BS32314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mod(r)-RB | 86..676 | 17..607 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:32:41 Download gff for
BS32314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mod(r)-RB | 86..676 | 17..607 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:32:41 Download gff for
BS32314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 621891..622146 | 17..272 | 100 | -> | Plus |
X | 622207..622358 | 273..424 | 100 | -> | Plus |
X | 622446..622628 | 425..607 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:11:57 Download gff for
BS32314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 515924..516179 | 17..272 | 100 | -> | Plus |
arm_X | 516240..516391 | 273..424 | 100 | -> | Plus |
arm_X | 516479..516661 | 425..607 | 100 | | Plus |
BS32314.pep Sequence
Translation from 16 to 606
> BS32314.pep
MPTTPQDLALAHSLAQRPPTDSSEAKEQEAGESDNLPNLCTLSLDELKQL
DRDPEFFEDFIEEMSVVQYLNEELDSMMDQVEIISRENECKGIHLVELKR
RLSDDFTALKNLGEKCDRLNKKYFKKSDEYAPQHIRIAASNADGDCDRHV
EHFLNGKTDVQTFLNTYQWSKKISTERKAKEERLGTQLSALERAGI*
BS32314.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mod(r)-PE | 196 | CG17828-PE | 1..196 | 1..196 | 1016 | 100 | Plus |
mod(r)-PD | 196 | CG17828-PD | 1..196 | 1..196 | 1016 | 100 | Plus |
mod(r)-PB | 196 | CG17828-PB | 1..196 | 1..196 | 1016 | 100 | Plus |
mod(r)-PF | 200 | CG17828-PF | 1..200 | 1..196 | 1001 | 98 | Plus |
mod(r)-PC | 200 | CG17828-PC | 1..200 | 1..196 | 1001 | 98 | Plus |