BS32316.complete Sequence
1019 bp assembled on 2013-05-22
> BS32316.complete
GAAGTTATCAGTCGACATGTGCTCCCGCGACTGTTGCTCCGGACCAGGTG
GCTCCAATCGAGGCAACACTTGCTCGGACAAGAAGGGCGCCAAGGCCGGC
AGTCTCACTGGCGAGAAGATCATACCCACTCCACAGAGCCTGCTGTATCC
CTATGAGGTCATCGAGGAGATCGCCGACTTCATTACCAAGGGGTCCGGCA
TGCGCCCCAAGATCGGCATCATCTGCGGCTCTGGGCTAGGCTCATTGGCC
GATATGATCCAGGACCCGAAGATCTTCGAGTATGAGAAGATCCCCAACTT
CCCGGTATCTACAGTTGAGGGCCATGCCGGACGACTGGTGGTCGGCACAC
TCGAGGGCGCCACTGTGATGGCGATGCAGGGCAGGTTCCACTTCTACGAG
GGCTATCCGCTGGCCAAGTGCTCAATGCCGGTTCGCGTGATGAAGCTGTG
CGGTGTGGAATACCTGTTCGCCACCAATGCGGCTGGTGGAATCAATCCAC
GGTTCGCGGTGGGCGACATCATGCTGATGCATGACCATGTCAACATGCTG
GGCTTTGCCGGAAATTCTCCGCTCCAGGGACCCAATGACCCACGCTTCGG
ACCCCGCTTTCCCGCCCTGGTGAACTCGTACAACAAGGACCTAATCAACA
AGGCCATCGAGATCGCCAAGGCCATGGGCATAGAGTCCAACATTCACGTC
GGCGTATACTCCTGTCTGGGTGGTCCCAACTACGAGACCATCGCCGAGCT
GAAGGCCCTGCGCATGATGGGCGTGGATGCGGTGGGCATGTCCACCGTAC
ATGAGGTCATCACTGCACGGCACTGCGACATGAAGGTATTCGCCTTCAGC
CTCATCACAAATAAGTGCGCCACCGAGTACAGCGATAAGAAGGACGATGA
GGCCAACCACGATGAGGTTATGGCTGTGGCCAAGAACAGGCAAAAGGCCT
GCTGCGAACTGGTCTCCCGACTCATCCGGGAAATCCACTTGGCATCCGCT
TAAAAGCTTTCTAGACCAT
BS32316.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:40:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16758-RG | 1119 | CG16758-PG | 133..1119 | 17..1003 | 4935 | 100 | Plus |
| CG16758-RF | 987 | CG16758-PF | 1..987 | 17..1003 | 4935 | 100 | Plus |
| CG16758-RE | 966 | CG16758-PE | 82..966 | 119..1003 | 4365 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:40:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16758-RG | 1617 | CG16758-RG | 466..1452 | 17..1003 | 4935 | 100 | Plus |
| CG16758-RF | 1245 | CG16758-RF | 94..1080 | 17..1003 | 4935 | 100 | Plus |
| CG16758-RE | 1449 | CG16758-RE | 400..1284 | 119..1003 | 4365 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:40:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2499689..2500462 | 918..145 | 3870 | 100 | Minus |
| 3L | 28110227 | 3L | 2502592..2502722 | 147..17 | 655 | 100 | Minus |
| 3L | 28110227 | 3L | 2499537..2499625 | 1003..915 | 445 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:40:52 has no hits.
BS32316.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:21 Download gff for
BS32316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16758-RF | 94..1078 | 17..1001 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:11:58 Download gff for
BS32316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16758-RF | 94..1078 | 17..1001 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:32:43 Download gff for
BS32316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16758-RF | 94..1078 | 17..1001 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:32:43 Download gff for
BS32316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2499539..2499623 | 917..1001 | 100 | <- | Minus |
| 3L | 2499691..2500462 | 145..916 | 100 | <- | Minus |
| 3L | 2502595..2502722 | 17..144 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:11:58 Download gff for
BS32316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2502595..2502722 | 17..144 | 100 | | Minus |
| arm_3L | 2499539..2499623 | 917..1001 | 100 | <- | Minus |
| arm_3L | 2499691..2500462 | 145..916 | 100 | <- | Minus |
BS32316.pep Sequence
Translation from 16 to 1002
> BS32316.pep
MCSRDCCSGPGGSNRGNTCSDKKGAKAGSLTGEKIIPTPQSLLYPYEVIE
EIADFITKGSGMRPKIGIICGSGLGSLADMIQDPKIFEYEKIPNFPVSTV
EGHAGRLVVGTLEGATVMAMQGRFHFYEGYPLAKCSMPVRVMKLCGVEYL
FATNAAGGINPRFAVGDIMLMHDHVNMLGFAGNSPLQGPNDPRFGPRFPA
LVNSYNKDLINKAIEIAKAMGIESNIHVGVYSCLGGPNYETIAELKALRM
MGVDAVGMSTVHEVITARHCDMKVFAFSLITNKCATEYSDKKDDEANHDE
VMAVAKNRQKACCELVSRLIREIHLASA*
BS32316.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16758-PF | 328 | CG16758-PF | 1..328 | 1..328 | 1729 | 100 | Plus |
| CG16758-PG | 372 | CG16758-PG | 45..372 | 1..328 | 1729 | 100 | Plus |
| CG16758-PH | 396 | CG16758-PH | 45..396 | 1..328 | 1694 | 93.2 | Plus |
| CG16758-PE | 321 | CG16758-PE | 1..321 | 1..328 | 1561 | 91.8 | Plus |
| CG16758-PD | 329 | CG16758-PD | 13..329 | 8..328 | 1497 | 91 | Plus |
