BS32317.complete Sequence
689 bp assembled on 2013-05-22
> BS32317.complete
GAAGTTATCAGTCGACATGTTGGACTTCTACTATATGCTCTACTCGGCAC
CTTGCCGTTCCATCCTGATGACGGCCCGTGCCCTGGGATTGGAGCTGAAC
AAGAAGCAGGTGGATCTGGATGCCGGCGAGCATCTTAAGCCGGAATTTGT
AAAGATCAATCCTCAGCATACGATTCCCACGCTGGTTGACGATGGTTTCG
CCATCTGGGAGTCGAGGGCTATACTGATTTATCTGGCCGAGAAGTACGAT
AAAGATGGCTCCCTTTATCCCAAGGATCCCCAGCAGAGAGCCGTGATCAA
TCAGCGCCTGTTTTTCGATCTGAGTACTCTGTACCAGAGCTACGTGTACT
ACTACTATCCCCAGTTGTTCGAGGATGTGAAGAAGCCAGCTGATCCCGAT
AACCTCAAGAAGATCGATGATGCTTTCGCTATGTTCAATACTCTGTTGAA
GGGTCAGCAGTACGCCGCCCTCAACAAGTTGACTCTGGCCGATTTTGCGC
TTCTGGCCACCGTTTCCACTTTTGAAATATCGGAATATGATTTTGGTAAA
TATCCGGAAGTGGTTAGGTGGTACGACAATGCCAAGAAAGTGATACCCGG
CTGGGAGGAGAACTGGGAGGGCTGCGAGTACTACAAGAAATTGTATCTGG
GTGCGATTTTGAACAAACAATGAAAGCTTTCTAGACCAT
BS32317.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:40:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstD9-RB | 657 | CG10091-PB | 1..657 | 17..673 | 3285 | 100 | Plus |
| GstD9-RA | 657 | CG10091-PA | 1..657 | 17..673 | 3285 | 100 | Plus |
| GstD1-RB | 630 | CG10045-PB | 7..355 | 23..371 | 425 | 74.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:40:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstD9-RB | 786 | CG10091-RB | 51..708 | 16..673 | 3290 | 100 | Plus |
| GstD9-RA | 775 | CG10091-RA | 40..697 | 16..673 | 3290 | 100 | Plus |
| GstD1-RB | 843 | CG10045-RB | 95..443 | 23..371 | 425 | 74.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:40:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12366241..12366898 | 673..16 | 3290 | 100 | Minus |
| 3R | 32079331 | 3R | 12368217..12368565 | 371..23 | 425 | 74.8 | Minus |
| 3R | 32079331 | 3R | 12372115..12372340 | 137..362 | 350 | 77 | Plus |
| 3R | 32079331 | 3R | 12374270..12374452 | 137..319 | 300 | 77.6 | Plus |
| 3R | 32079331 | 3R | 12373214..12373371 | 152..309 | 265 | 77.8 | Plus |
| 3R | 32079331 | 3R | 12365221..12365423 | 341..139 | 220 | 73.9 | Minus |
| 3R | 32079331 | 3R | 12372538..12372594 | 566..622 | 195 | 89.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:40:55 has no hits.
BS32317.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:23 Download gff for
BS32317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstD9-RA | 46..696 | 22..672 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:01 Download gff for
BS32317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstD9-RA | 46..696 | 22..672 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:32:45 Download gff for
BS32317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstD9-RA | 46..696 | 22..672 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:32:45 Download gff for
BS32317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12366242..12366892 | 22..672 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:01 Download gff for
BS32317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8191964..8192614 | 22..672 | 100 | | Minus |
BS32317.pep Sequence
Translation from 16 to 672
> BS32317.pep
MLDFYYMLYSAPCRSILMTARALGLELNKKQVDLDAGEHLKPEFVKINPQ
HTIPTLVDDGFAIWESRAILIYLAEKYDKDGSLYPKDPQQRAVINQRLFF
DLSTLYQSYVYYYYPQLFEDVKKPADPDNLKKIDDAFAMFNTLLKGQQYA
ALNKLTLADFALLATVSTFEISEYDFGKYPEVVRWYDNAKKVIPGWEENW
EGCEYYKKLYLGAILNKQ*
BS32317.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstD9-PB | 218 | CG10091-PB | 1..218 | 1..218 | 1160 | 100 | Plus |
| GstD9-PA | 218 | CG10091-PA | 1..218 | 1..218 | 1160 | 100 | Plus |
| GstD1-PB | 209 | CG10045-PB | 1..208 | 1..210 | 761 | 65.7 | Plus |
| GstD1-PA | 209 | CG10045-PA | 1..208 | 1..210 | 761 | 65.7 | Plus |
| GstD8-PA | 212 | CG4421-PA | 1..206 | 2..209 | 698 | 61.1 | Plus |
