BS32318.complete Sequence
833 bp assembled on 2013-05-22
> BS32318.complete
GAAGTTATCAGTCGACATGTCGCATCATCAACACGTTCTTTCCGAGGCCG
CTGCCCTTCGTCTGATTAACGGTCTGGAGTCAGCCGGCAATGCCACAATG
CCACTCGGCGCTCAGCCGCCTCAGTCAGCGGCAGCTGAAGCAATCTGCTC
GTCGCAAATCGTAGCATCGGCACATGGCACGCCCACTGCATCCACGGCAG
CACTGGAAATATCCTCAGCACGACAACGGATGCTGCGAAGTCACCTACAG
GAGAGCCTCCATTCGGCGAACGAAAGCGGCAACTCGTGCCGCATCTGCCG
CTGGAACCGCAACGACATGGAGATCATCAAATGTCCCTGCAACTGCAAGG
GCAGCGTGGGCTACATCCACCTAAAGTGCTTGAAGCGCTGGATCATGCAC
AGGCGGGATAATCGCTGTGAGATCTGCAATGCGGTCTTTAATATCGCGGA
GGAGCGGGCCAGTCTGAAGCAAATGATCCGAACCTTCTGCTGCGGCCGTT
GTTGCGGCCTGATTGTGAAGCATCTGCTATTTAGCGCCTCGCTAATGCCA
CTAGCCCATATCATCTTGCAGCAGGTGCTGCAGTGCATGGATAATATGAA
TCAAGGCAGCACCGATCAGTTAACCGTCCAGGAGGTGTTTGTCGCCTCTT
GTGCCCTTCTGACCTCCAGTGCACTTTTCTTCCACTTCTTTGAGTTTGTC
ACCACACGATTTATGCTCATCCGGAACATTCTCAGCCACTGGTGGATGTT
TGGCAGCACCTCCGATTTTGAGCTGGTGGAGATTGAGGATGATTCCATCG
ATTTTTTCGATGATTAGAAGCTTTCTAGACCAT
BS32318.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:41:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17717-RA | 801 | CG17717-PA | 1..801 | 17..817 | 3975 | 99.8 | Plus |
CG17717-RB | 783 | CG17717-PB | 1..783 | 17..817 | 3670 | 97.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:41:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17717-RA | 1092 | CG17717-RA | 202..1002 | 17..817 | 3975 | 99.8 | Plus |
CG17717-RB | 1074 | CG17717-RB | 202..984 | 17..817 | 3670 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:40:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6589491..6589833 | 17..359 | 1685 | 99.4 | Plus |
X | 23542271 | X | 6590311..6590556 | 572..817 | 1230 | 100 | Plus |
X | 23542271 | X | 6590032..6590251 | 358..577 | 1100 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 13:41:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TART-A | 13424 | TART-A 13424bp | 423..505 | 509..431 | 108 | 62.7 | Minus |
BS32318.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:24 Download gff for
BS32318.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17717-RA | 202..1002 | 17..817 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:04 Download gff for
BS32318.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17717-RA | 202..1002 | 17..817 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:32:47 Download gff for
BS32318.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17717-RA | 202..1002 | 17..817 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:32:47 Download gff for
BS32318.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6589491..6589832 | 17..358 | 99 | -> | Plus |
X | 6590033..6590248 | 359..574 | 100 | -> | Plus |
X | 6590314..6590556 | 575..817 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:04 Download gff for
BS32318.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6483524..6483865 | 17..358 | 99 | -> | Plus |
arm_X | 6484066..6484281 | 359..574 | 100 | -> | Plus |
arm_X | 6484347..6484589 | 575..817 | 100 | | Plus |
BS32318.pep Sequence
Translation from 16 to 816
> BS32318.pep
MSHHQHVLSEAAALRLINGLESAGNATMPLGAQPPQSAAAEAICSSQIVA
SAHGTPTASTAALEISSARQRMLRSHLQESLHSANESGNSCRICRWNRND
MEIIKCPCNCKGSVGYIHLKCLKRWIMHRRDNRCEICNAVFNIAEERASL
KQMIRTFCCGRCCGLIVKHLLFSASLMPLAHIILQQVLQCMDNMNQGSTD
QLTVQEVFVASCALLTSSALFFHFFEFVTTRFMLIRNILSHWWMFGSTSD
FELVEIEDDSIDFFDD*
BS32318.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17717-PA | 266 | CG17717-PA | 1..266 | 1..266 | 1404 | 100 | Plus |
CG17717-PB | 260 | CG17717-PB | 1..260 | 1..266 | 1353 | 97.7 | Plus |