Clone BS32318 Report

Search the DGRC for BS32318

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:323
Well:18
Vector:pDNR-Dual
Associated Gene/TranscriptCG17717-RA
Protein status:BS32318.pep: gold
Sequenced Size:833

Clone Sequence Records

BS32318.complete Sequence

833 bp assembled on 2013-05-22

> BS32318.complete
GAAGTTATCAGTCGACATGTCGCATCATCAACACGTTCTTTCCGAGGCCG
CTGCCCTTCGTCTGATTAACGGTCTGGAGTCAGCCGGCAATGCCACAATG
CCACTCGGCGCTCAGCCGCCTCAGTCAGCGGCAGCTGAAGCAATCTGCTC
GTCGCAAATCGTAGCATCGGCACATGGCACGCCCACTGCATCCACGGCAG
CACTGGAAATATCCTCAGCACGACAACGGATGCTGCGAAGTCACCTACAG
GAGAGCCTCCATTCGGCGAACGAAAGCGGCAACTCGTGCCGCATCTGCCG
CTGGAACCGCAACGACATGGAGATCATCAAATGTCCCTGCAACTGCAAGG
GCAGCGTGGGCTACATCCACCTAAAGTGCTTGAAGCGCTGGATCATGCAC
AGGCGGGATAATCGCTGTGAGATCTGCAATGCGGTCTTTAATATCGCGGA
GGAGCGGGCCAGTCTGAAGCAAATGATCCGAACCTTCTGCTGCGGCCGTT
GTTGCGGCCTGATTGTGAAGCATCTGCTATTTAGCGCCTCGCTAATGCCA
CTAGCCCATATCATCTTGCAGCAGGTGCTGCAGTGCATGGATAATATGAA
TCAAGGCAGCACCGATCAGTTAACCGTCCAGGAGGTGTTTGTCGCCTCTT
GTGCCCTTCTGACCTCCAGTGCACTTTTCTTCCACTTCTTTGAGTTTGTC
ACCACACGATTTATGCTCATCCGGAACATTCTCAGCCACTGGTGGATGTT
TGGCAGCACCTCCGATTTTGAGCTGGTGGAGATTGAGGATGATTCCATCG
ATTTTTTCGATGATTAGAAGCTTTCTAGACCAT

BS32318.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:41:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG17717-RA 801 CG17717-PA 1..801 17..817 3975 99.8 Plus
CG17717-RB 783 CG17717-PB 1..783 17..817 3670 97.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:41:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG17717-RA 1092 CG17717-RA 202..1002 17..817 3975 99.8 Plus
CG17717-RB 1074 CG17717-RB 202..984 17..817 3670 97.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:40:59
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6589491..6589833 17..359 1685 99.4 Plus
X 23542271 X 6590311..6590556 572..817 1230 100 Plus
X 23542271 X 6590032..6590251 358..577 1100 100 Plus
Blast to na_te.dros performed 2014-11-28 13:41:00
Subject Length Description Subject Range Query Range Score Percent Strand
TART-A 13424 TART-A 13424bp 423..505 509..431 108 62.7 Minus

BS32318.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:24 Download gff for BS32318.complete
Subject Subject Range Query Range Percent Splice Strand
CG17717-RA 202..1002 17..817 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:04 Download gff for BS32318.complete
Subject Subject Range Query Range Percent Splice Strand
CG17717-RA 202..1002 17..817 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:32:47 Download gff for BS32318.complete
Subject Subject Range Query Range Percent Splice Strand
CG17717-RA 202..1002 17..817 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:32:47 Download gff for BS32318.complete
Subject Subject Range Query Range Percent Splice Strand
X 6589491..6589832 17..358 99 -> Plus
X 6590033..6590248 359..574 100 -> Plus
X 6590314..6590556 575..817 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:04 Download gff for BS32318.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6483524..6483865 17..358 99 -> Plus
arm_X 6484066..6484281 359..574 100 -> Plus
arm_X 6484347..6484589 575..817 100   Plus

BS32318.pep Sequence

Translation from 16 to 816

> BS32318.pep
MSHHQHVLSEAAALRLINGLESAGNATMPLGAQPPQSAAAEAICSSQIVA
SAHGTPTASTAALEISSARQRMLRSHLQESLHSANESGNSCRICRWNRND
MEIIKCPCNCKGSVGYIHLKCLKRWIMHRRDNRCEICNAVFNIAEERASL
KQMIRTFCCGRCCGLIVKHLLFSASLMPLAHIILQQVLQCMDNMNQGSTD
QLTVQEVFVASCALLTSSALFFHFFEFVTTRFMLIRNILSHWWMFGSTSD
FELVEIEDDSIDFFDD*

BS32318.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG17717-PA 266 CG17717-PA 1..266 1..266 1404 100 Plus
CG17717-PB 260 CG17717-PB 1..260 1..266 1353 97.7 Plus