Clone BS32328 Report

Search the DGRC for BS32328

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:323
Well:28
Vector:pDNR-Dual
Associated Gene/TranscriptCG15510-RB
Protein status:BS32328.pep: gold
Sequenced Size:824

Clone Sequence Records

BS32328.complete Sequence

824 bp assembled on 2013-05-22

> BS32328.complete
GAAGTTATCAGTCGACATGGCAAACGTGAAGATCCAAGCGCCCACTTTCG
GAGCAGGTGAACAGGTATCTTTAGGTGGCCAAGGGCTTACCGATATTCCG
AGCACGAGGCATGCGAATATCATTTCAGTCAAAATTCGTTTTCGGGTGAA
AACAGTAACTGGAGCATTTTGGGAAATTCAAAGTCTACACAAAATTCAAA
GAATGGGGCGAAAAAGGGGTCGAAAGGAGTATTGTCCCCCCATTTACAAG
CGCCAGAAAGTGGCGCGCGTCACTAACAATGGATACCTCAACTTTATGAC
CGAGTACAAGAAACGCTTTTACGGACTTTCTCCGCAGGACATGGTGCATT
ATGCGGCTAAGCAGTGGACCCAGCTGTCCATGGCTGAGAAGGAAGCTTTC
AAGAGCAAGAAACCATCGACGATTACTTTGAAGAGTCCAGCACAGTACGT
GGCCTGTGAGATGAAAAGCGATGTCGCCGGAGGACAGCAAAGTTCTTGCC
AAAGACAGTCTCCAAGCGCTCGGCTGAGGGAATCGGAGAGGAGATCGTCC
AGATCGAAGACCTTGTGCAGATCAGCAAAGAATCGTCAGCGAGGGAAGCC
GAAACCTCAGCAAAGCAAGCGCAGGCTCAGTCACATGGGCTCGGCAGTGG
CATATATCCACTTCCTGCGCAAGTTCCAAAGGAAGAATACTGAGTTGCGC
ACCATCGATCTGCTGAAGACGGCAACTAGATTGTGGTGCCGGTTGCCCGA
AAGGCATCGCCATGCGTTTGAGAGGCCACTTTGGATTGTTACTATAGGAA
AATCCTAGAAGCTTTCTAGACCAT

BS32328.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:41:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG15510-RD 606 CG15510-PD 1..606 203..808 3015 99.8 Plus
CG15510-RB 606 CG15510-PB 1..606 203..808 3015 99.8 Plus
CG15510-RC 582 CG15510-PC 205..582 431..808 1875 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:41:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG15510-RB 1053 CG15510-RB 157..948 17..808 3900 99.5 Plus
CG15510-RD 769 CG15510-RD 1..664 145..808 3305 99.8 Plus
CG15510-RC 745 CG15510-RC 263..640 431..808 1875 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:41:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29836886..29837263 407..784 1890 100 Plus
3R 32079331 3R 29836530..29836832 107..409 1470 99 Plus
3R 32079331 3R 29836106..29836198 17..109 465 100 Plus
Blast to na_te.dros performed 2014-11-28 13:41:25
Subject Length Description Subject Range Query Range Score Percent Strand
blood 7410 blood BLOOD 7410bp 1169..1237 697..765 138 66.7 Plus

BS32328.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:31 Download gff for BS32328.complete
Subject Subject Range Query Range Percent Splice Strand
CG15510-RB 157..948 17..808 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:17 Download gff for BS32328.complete
Subject Subject Range Query Range Percent Splice Strand
CG15510-RB 157..948 17..808 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:32:55 Download gff for BS32328.complete
Subject Subject Range Query Range Percent Splice Strand
CG15510-RB 157..948 17..808 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:32:55 Download gff for BS32328.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29836106..29836197 17..108 100 -> Plus
3R 29836532..29836832 109..409 99 -> Plus
3R 29836889..29837262 410..783 100 -> Plus
3R 29837318..29837342 784..808 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:17 Download gff for BS32328.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25661828..25661919 17..108 100 -> Plus
arm_3R 25662254..25662554 109..409 99 -> Plus
arm_3R 25662611..25662984 410..783 100 -> Plus
arm_3R 25663040..25663064 784..808 96   Plus

BS32328.pep Sequence

Translation from 16 to 807

> BS32328.pep
MANVKIQAPTFGAGEQVSLGGQGLTDIPSTRHANIISVKIRFRVKTVTGA
FWEIQSLHKIQRMGRKRGRKEYCPPIYKRQKVARVTNNGYLNFMTEYKKR
FYGLSPQDMVHYAAKQWTQLSMAEKEAFKSKKPSTITLKSPAQYVACEMK
SDVAGGQQSSCQRQSPSARLRESERRSSRSKTLCRSAKNRQRGKPKPQQS
KRRLSHMGSAVAYIHFLRKFQRKNTELRTIDLLKTATRLWCRLPERHRHA
FERPLWIVTIGKS*

BS32328.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG15510-PD 201 CG15510-PD 1..201 63..263 1057 100 Plus
CG15510-PB 201 CG15510-PB 1..201 63..263 1057 100 Plus
CG15510-PC 193 CG15510-PC 1..193 63..263 999 96 Plus