Clone BS32329 Report

Search the DGRC for BS32329

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:323
Well:29
Vector:pDNR-Dual
Associated Gene/TranscriptCG42523-RA
Protein status:BS32329.pep: full length peptide match
Sequenced Size:587

Clone Sequence Records

BS32329.complete Sequence

587 bp assembled on 2013-05-22

> BS32329.complete
GAAGTTATCAGTCGACATGAACTTCAAGGCTCGTTATTCGAAATCTGTAA
GTCCACCGAAGCGAGTAGGAATATCCCTCGAGGATCCTGTGTCCAGCTGC
GATGAGTTTCCCAGACCCCTGGGTCCGATGTTGAAATACATAGCCCTGTC
TCCGAATTATCAGATGCCCAGGAGAAAAGCTCCTCTAAATAGGGCCAATG
TGCCAAAAACAAACCGGGCCAGAAAATCTGGAAAAAAACACAAGATGCAC
TTATCCAAGGCATCGACTTACGGCCGAAAGCGCCCTGCCAGAAAAGTCAC
AAAAAGGCGAGATGTGATCAACAAGAAACCCAGAAAATCGAAAGGCACCA
AGATCATTGGTGGGGAGGAGAAGCCCATAGAATCCAATAGTAGACCCTGG
TGGAAATTGTTGTTTAGCAGAAAGCAGAATGACGAAAAAACACAGCAAGA
TAACATATCCTGCAATGTTTTGATGACCGACAGGTCAACCCAAACGATTG
TCAGTCCTCAATGTAATAATATTGATGACGATAAACTTGCACCATTTGAC
AAGCCAAATAAATACATTTAGAAGCTTTCTAGACCAT

BS32329.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:41:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG42523-RB 555 CG42523-PB 1..555 17..571 2775 100 Plus
CG42523-RA 555 CG42523-PA 1..555 17..571 2775 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:41:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG42523-RB 995 CG42523-RB 87..641 17..571 2775 100 Plus
CG42523-RA 643 CG42523-RA 87..641 17..571 2775 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:41:29
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4762981..4763535 17..571 2775 100 Plus
Blast to na_te.dros performed 2014-11-28 13:41:30
Subject Length Description Subject Range Query Range Score Percent Strand
HeT-A 6083 HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). 4998..5065 506..573 106 61.8 Plus

BS32329.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:33 Download gff for BS32329.complete
Subject Subject Range Query Range Percent Splice Strand
CG42523-RA 45..599 17..571 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:20 Download gff for BS32329.complete
Subject Subject Range Query Range Percent Splice Strand
CG42523-RA 87..641 17..571 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:32:57 Download gff for BS32329.complete
Subject Subject Range Query Range Percent Splice Strand
CG42523-RA 87..641 17..571 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:32:57 Download gff for BS32329.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4762981..4763535 17..571 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:20 Download gff for BS32329.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4762981..4763535 17..571 100   Plus

BS32329.pep Sequence

Translation from 16 to 570

> BS32329.pep
MNFKARYSKSVSPPKRVGISLEDPVSSCDEFPRPLGPMLKYIALSPNYQM
PRRKAPLNRANVPKTNRARKSGKKHKMHLSKASTYGRKRPARKVTKRRDV
INKKPRKSKGTKIIGGEEKPIESNSRPWWKLLFSRKQNDEKTQQDNISCN
VLMTDRSTQTIVSPQCNNIDDDKLAPFDKPNKYI*

BS32329.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG42523-PB 184 CG42523-PB 1..184 1..184 975 100 Plus
CG42523-PA 184 CG42523-PA 1..184 1..184 975 100 Plus