BS32333.complete Sequence
1274 bp assembled on 2013-05-22
> BS32333.complete
GAAGTTATCAGTCGACATGGGAGAAGTTCCGAAAATCAAGAACTTGCCAC
AGGTGATCGAGCCTCACTTGCCAGAAGGGTGTACGCTGGACTCGTACTCC
ACTAGCTACCTAACCAAGCCCGGGGACAACTATGGCAGCATTATGTTATC
TGTCCAAGCGAAAATCCGCAGTGCAGACGGTGGTATTCGGGATTTGCCGC
TGATAGCCAAGTTGCCGCCCCTCACCAACGACCTTTACTGGCAGATCTTC
CAACCCGAGCGGACTTGCATTACGGAGAACGCGGTGTACCAGTATCTGTC
GCCGGAGCTGGATAAGTTGCAGCTGGAGTCAGGCATTCTGCCCGCCCAAA
TTTTTGACGGCTTTCCGCGATACTACGGCTCCCGCGTATCACTGGACAAC
CGCGCTACAAAAGTGGATCGGGATGCCGTTCTGGTCCAAGAGAACGTCAC
TACGCGCGGCTATCGACCTGGTAACAGACACCGGCCGTACAATCTCGCAG
AAACTGTGCTTATTCTGCACTATTTGGCCCAATACCATGCCCTGCCTATC
GCCCTGCGCCTGAAAAAACCGCAGGTGTACGAGGAGTATGTGCGGCCATA
CTTCAAGAAGTTCGATATGAACTCTAATATTGATCAGGCCGAGACGGAAA
TAATGAACAAGGAAATTTTAAAGGACATAAAGTTGGTGACTAGCGACGAA
CGGGACGTAAATCGCGTCAAGGAGCTGCTGGACATTTTCCAGGCTTTTCA
AGCTAGCAACGATGTGGACGACGGCCCATTCACTACCCTCGTGCACGGAG
ACCTGTGGATCAACAATATGATGCTAAAATACGGTGAGGAAGGCACTCCA
CTCAAGGTGAAAATTGTTGACTTTCAAATCGCGCAGTACGGATCATTGGT
GCATGATATCATCTTTGTGCTGTTCTCAAGTGTGGACGTAAATGTTCTCG
AGGACAATTTCTACAATTTCCTGACCATTTATTACAACGCCTTCATTCAG
ACCTTGCGCAGCGTGAATGTGGACACCAGCAACTACACATACGAATTGTT
TCTCGAAGAGGTACAGCAAACTGCACACGTGCAGTTGCCTCACGCGATCT
TTATGATGAAGGTTATACTGGCTGATAACAGTACGATTCCTAAAGACTAT
AAAGACGTGGATTTCTCGGTGCTCACAAAGAACACGGGTGCAAAAACTAT
TGTGACAAAATTTGAGGCTATCTTGCGACTAGGGAAAAAGTTTAATATAT
TTTACTGAAAGCTTTCTAGACCAT
BS32333.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:39:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31974-RC | 1242 | CG31974-PC | 1..1242 | 17..1258 | 6210 | 100 | Plus |
| CG31974-RB | 1242 | CG31974-PB | 1..1242 | 17..1258 | 6210 | 100 | Plus |
| CG31974-RD | 1251 | CG31974-PD | 1..1251 | 17..1258 | 6085 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:39:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31974-RC | 1380 | CG31974-RC | 86..1327 | 17..1258 | 6210 | 100 | Plus |
| CG31974-RB | 1838 | CG31974-RB | 544..1785 | 17..1258 | 6210 | 100 | Plus |
| CG31974-RD | 1908 | CG31974-RD | 605..1855 | 17..1258 | 6085 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:39:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 141669..142487 | 835..17 | 4095 | 100 | Minus |
| 2L | 23513712 | 2L | 141394..141610 | 1049..833 | 1085 | 100 | Minus |
| 2L | 23513712 | 2L | 141130..141340 | 1258..1048 | 1055 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:39:48 has no hits.
BS32333.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 09:59:57 Download gff for
BS32333.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31974-RB | 431..1671 | 17..1257 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:11:28 Download gff for
BS32333.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31974-RB | 544..1784 | 17..1257 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:32:16 Download gff for
BS32333.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31974-RB | 544..1784 | 17..1257 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:32:16 Download gff for
BS32333.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 141671..142487 | 17..833 | 100 | | Minus |
| 2L | 141131..141340 | 1048..1257 | 100 | <- | Minus |
| 2L | 141396..141609 | 834..1047 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:11:28 Download gff for
BS32333.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 141131..141340 | 1048..1257 | 100 | <- | Minus |
| arm_2L | 141396..141609 | 834..1047 | 100 | <- | Minus |
| arm_2L | 141671..142487 | 17..833 | 100 | | Minus |
BS32333.pep Sequence
Translation from 16 to 1257
> BS32333.pep
MGEVPKIKNLPQVIEPHLPEGCTLDSYSTSYLTKPGDNYGSIMLSVQAKI
RSADGGIRDLPLIAKLPPLTNDLYWQIFQPERTCITENAVYQYLSPELDK
LQLESGILPAQIFDGFPRYYGSRVSLDNRATKVDRDAVLVQENVTTRGYR
PGNRHRPYNLAETVLILHYLAQYHALPIALRLKKPQVYEEYVRPYFKKFD
MNSNIDQAETEIMNKEILKDIKLVTSDERDVNRVKELLDIFQAFQASNDV
DDGPFTTLVHGDLWINNMMLKYGEEGTPLKVKIVDFQIAQYGSLVHDIIF
VLFSSVDVNVLEDNFYNFLTIYYNAFIQTLRSVNVDTSNYTYELFLEEVQ
QTAHVQLPHAIFMMKVILADNSTIPKDYKDVDFSVLTKNTGAKTIVTKFE
AILRLGKKFNIFY*
BS32333.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:17:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31974-PC | 413 | CG31974-PC | 1..413 | 1..413 | 2143 | 100 | Plus |
| CG31974-PB | 413 | CG31974-PB | 1..413 | 1..413 | 2143 | 100 | Plus |
| CG31974-PD | 416 | CG31974-PD | 1..416 | 1..413 | 2129 | 99.3 | Plus |
| CG31975-PC | 416 | CG31975-PC | 5..416 | 3..413 | 950 | 46.5 | Plus |
| CG31975-PB | 416 | CG31975-PB | 5..416 | 3..413 | 950 | 46.5 | Plus |
