BS32334.complete Sequence
917 bp assembled on 2013-05-22
> BS32334.complete
GAAGTTATCAGTCGACATGGGCAAGGATCAGCATTTGCTGGAGGCTTCGC
GAGCCGGCGACATCAAGACGGTGGACAAACTGCTGGAGCACTCGAGCAAA
CGACATGGCCCGCTGTCCAGTTTTAGGCGAAGTCCCAGCATCAACTGCCA
GGACATGAATGGCTACACTTCGCTGCATCACGCCTGTCTAAATGGGCATA
GCAACATTGTACGGCTACTACTCTCCCACAACGCGCTGTTGGATGTGCCT
GATATACGTGGCTCGACACCTTTATTTCTGGCTGCCTGGGCTGGGCACCA
GGACATCGTCAAGATGCTGTTGATGCACTCGCCTACGGGAGCCAATCCGA
ATGCCCAGACTATCGAAAACGAGACGCCGCTGCACTCAGGCGCCCAACAT
GGCCACAATGCCGTGGTGGCCATTTTGCTGTCCTATGGCGCCGATCCTGC
CATACGCAACAATAGCTTTCAAACGGCTCTGGATTTGGCAGCGCAATTCG
GACGCCTTCAGGTGGTTCAGACCTTGCTCCGTGTTTATCCCGACCTCATA
TTGCCGTATAAGCGTTTGGAAGATGACAATGAAGAGCTGCTGGGCTGCAT
GCCCATAAAGCACATATTCACGCACACCTGCCTGCACCTGGCCAGCAGGA
ATGGGCACAAGAAGGTGGTGGAAACACTGCTGGCGGCCGGCGTCGATGTC
AACATACTCACCAACGCTGGAAGCGCTCTCCACGAGGCGGCTCTCTGTGG
CAAAAAGTCCGTTGTGGTCACTCTGCTTAAGGCCGGTATCTACGTACACG
CCACCGATGGAAACGGACGCACAGCCCTGGACATACTCTCCGATTACCCG
CCGCATGTGACCTACGACATTGTGGGCGCCATAAACGGTGCGTACGAGTA
AAAGCTTTCTAGACCAT
BS32334.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:41:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11168-RE | 2550 | CG11168-PE | 1..871 | 17..887 | 4340 | 99.9 | Plus |
CG11168-RD | 2592 | CG11168-PD | 1..871 | 17..887 | 4340 | 99.9 | Plus |
CG11168-RC | 999 | CG11168-PC | 1..871 | 17..887 | 4340 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:41:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11168-RE | 2903 | CG11168-RE | 155..1025 | 17..887 | 4340 | 99.9 | Plus |
CG11168-RD | 2945 | CG11168-RD | 155..1025 | 17..887 | 4340 | 99.9 | Plus |
CG11168-RC | 3249 | CG11168-RC | 190..1060 | 17..887 | 4340 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:41:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24918814..24919597 | 118..901 | 3905 | 99.9 | Plus |
3R | 32079331 | 3R | 24918652..24918755 | 17..120 | 520 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:41:10 has no hits.
BS32334.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:27 Download gff for
BS32334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11168-RB | 150..1032 | 17..899 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:09 Download gff for
BS32334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11168-RC | 190..1067 | 17..895 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:32:50 Download gff for
BS32334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11168-RC | 190..1067 | 17..895 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:32:50 Download gff for
BS32334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24918652..24918755 | 17..120 | 100 | -> | Plus |
3R | 24918817..24919595 | 121..899 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:09 Download gff for
BS32334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20744374..20744477 | 17..120 | 100 | -> | Plus |
arm_3R | 20744539..20745317 | 121..899 | 99 | | Plus |
BS32334.pep Sequence
Translation from 16 to 900
> BS32334.pep
MGKDQHLLEASRAGDIKTVDKLLEHSSKRHGPLSSFRRSPSINCQDMNGY
TSLHHACLNGHSNIVRLLLSHNALLDVPDIRGSTPLFLAAWAGHQDIVKM
LLMHSPTGANPNAQTIENETPLHSGAQHGHNAVVAILLSYGADPAIRNNS
FQTALDLAAQFGRLQVVQTLLRVYPDLILPYKRLEDDNEELLGCMPIKHI
FTHTCLHLASRNGHKKVVETLLAAGVDVNILTNAGSALHEAALCGKKSVV
VTLLKAGIYVHATDGNGRTALDILSDYPPHVTYDIVGAINGAYE*
BS32334.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11168-PC | 332 | CG11168-PC | 1..290 | 1..290 | 1511 | 100 | Plus |
CG11168-PE | 849 | CG11168-PE | 1..290 | 1..290 | 1511 | 100 | Plus |
CG11168-PD | 863 | CG11168-PD | 1..290 | 1..290 | 1511 | 100 | Plus |
CG11168-PA | 863 | CG11168-PA | 1..290 | 1..290 | 1511 | 100 | Plus |
CG4393-PD | 1325 | CG4393-PD | 1..293 | 1..290 | 866 | 59.4 | Plus |