Clone BS32334 Report

Search the DGRC for BS32334

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:323
Well:34
Vector:pDNR-Dual
Associated Gene/TranscriptCG11168-RB
Protein status:BS32334.pep: full length peptide match
Sequenced Size:917

Clone Sequence Records

BS32334.complete Sequence

917 bp assembled on 2013-05-22

> BS32334.complete
GAAGTTATCAGTCGACATGGGCAAGGATCAGCATTTGCTGGAGGCTTCGC
GAGCCGGCGACATCAAGACGGTGGACAAACTGCTGGAGCACTCGAGCAAA
CGACATGGCCCGCTGTCCAGTTTTAGGCGAAGTCCCAGCATCAACTGCCA
GGACATGAATGGCTACACTTCGCTGCATCACGCCTGTCTAAATGGGCATA
GCAACATTGTACGGCTACTACTCTCCCACAACGCGCTGTTGGATGTGCCT
GATATACGTGGCTCGACACCTTTATTTCTGGCTGCCTGGGCTGGGCACCA
GGACATCGTCAAGATGCTGTTGATGCACTCGCCTACGGGAGCCAATCCGA
ATGCCCAGACTATCGAAAACGAGACGCCGCTGCACTCAGGCGCCCAACAT
GGCCACAATGCCGTGGTGGCCATTTTGCTGTCCTATGGCGCCGATCCTGC
CATACGCAACAATAGCTTTCAAACGGCTCTGGATTTGGCAGCGCAATTCG
GACGCCTTCAGGTGGTTCAGACCTTGCTCCGTGTTTATCCCGACCTCATA
TTGCCGTATAAGCGTTTGGAAGATGACAATGAAGAGCTGCTGGGCTGCAT
GCCCATAAAGCACATATTCACGCACACCTGCCTGCACCTGGCCAGCAGGA
ATGGGCACAAGAAGGTGGTGGAAACACTGCTGGCGGCCGGCGTCGATGTC
AACATACTCACCAACGCTGGAAGCGCTCTCCACGAGGCGGCTCTCTGTGG
CAAAAAGTCCGTTGTGGTCACTCTGCTTAAGGCCGGTATCTACGTACACG
CCACCGATGGAAACGGACGCACAGCCCTGGACATACTCTCCGATTACCCG
CCGCATGTGACCTACGACATTGTGGGCGCCATAAACGGTGCGTACGAGTA
AAAGCTTTCTAGACCAT

BS32334.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:41:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG11168-RE 2550 CG11168-PE 1..871 17..887 4340 99.9 Plus
CG11168-RD 2592 CG11168-PD 1..871 17..887 4340 99.9 Plus
CG11168-RC 999 CG11168-PC 1..871 17..887 4340 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:41:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG11168-RE 2903 CG11168-RE 155..1025 17..887 4340 99.9 Plus
CG11168-RD 2945 CG11168-RD 155..1025 17..887 4340 99.9 Plus
CG11168-RC 3249 CG11168-RC 190..1060 17..887 4340 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:41:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24918814..24919597 118..901 3905 99.9 Plus
3R 32079331 3R 24918652..24918755 17..120 520 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:41:10 has no hits.

BS32334.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:27 Download gff for BS32334.complete
Subject Subject Range Query Range Percent Splice Strand
CG11168-RB 150..1032 17..899 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:09 Download gff for BS32334.complete
Subject Subject Range Query Range Percent Splice Strand
CG11168-RC 190..1067 17..895 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:32:50 Download gff for BS32334.complete
Subject Subject Range Query Range Percent Splice Strand
CG11168-RC 190..1067 17..895 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:32:50 Download gff for BS32334.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24918652..24918755 17..120 100 -> Plus
3R 24918817..24919595 121..899 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:09 Download gff for BS32334.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20744374..20744477 17..120 100 -> Plus
arm_3R 20744539..20745317 121..899 99   Plus

BS32334.pep Sequence

Translation from 16 to 900

> BS32334.pep
MGKDQHLLEASRAGDIKTVDKLLEHSSKRHGPLSSFRRSPSINCQDMNGY
TSLHHACLNGHSNIVRLLLSHNALLDVPDIRGSTPLFLAAWAGHQDIVKM
LLMHSPTGANPNAQTIENETPLHSGAQHGHNAVVAILLSYGADPAIRNNS
FQTALDLAAQFGRLQVVQTLLRVYPDLILPYKRLEDDNEELLGCMPIKHI
FTHTCLHLASRNGHKKVVETLLAAGVDVNILTNAGSALHEAALCGKKSVV
VTLLKAGIYVHATDGNGRTALDILSDYPPHVTYDIVGAINGAYE*

BS32334.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG11168-PC 332 CG11168-PC 1..290 1..290 1511 100 Plus
CG11168-PE 849 CG11168-PE 1..290 1..290 1511 100 Plus
CG11168-PD 863 CG11168-PD 1..290 1..290 1511 100 Plus
CG11168-PA 863 CG11168-PA 1..290 1..290 1511 100 Plus
CG4393-PD 1325 CG4393-PD 1..293 1..290 866 59.4 Plus