BS32338.complete Sequence
587 bp assembled on 2013-05-22
> BS32338.complete
GAAGTTATCAGTCGACATGCGGAAGGTGCAGGCTTTGGTTCAGACGCGCG
ACGGCAAGAAGACCGTCTACGAGGTGGATCGCTTAGGAACGGTGGCCAGC
CTGAAGGCACGGATCGGGCAAGCCATGTCCGTGCCCATGGGCTTCAGTCG
GCTGTCGTACAAGGGTCGCGTGCTATCCAATCAGAGCGTACTGGAGGATT
TGGGGCCCAATAAGTCCACCCTGGATCTCACCTGGAAGCCGGTCGTCCTG
ACGGCCAATCAGAGCAGCAAGTTAAGCAAGTTCGGCTATGGCAGGATAGA
CGATAGTGAAGTTATGTTTACACTGATCGGCGGCTACCAGCAACGCGAAG
AATATCCTGGTGGCATAGTCAATCCACCGGACGACGAAAGTCAACAAAAC
TTCAACGCAGGTGACGATGATGATGCACTGGAGGCCCAGGACATGACTGG
ACACGATTTGTCCTCAATTCAAACCGATGATTTATCGCTCAAAGGCCAGA
CGGAACCGGAGCTGGATTGCTCCATTGGATCTCATGGATTCTCTGGATCT
CAAGAAGAAGGCCAAGAATAAAAGCTTTCTAGACCAT
BS32338.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:38:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33223-RB | 555 | CG33223-PB | 1..555 | 17..571 | 2775 | 100 | Plus |
| CG33223-RA | 555 | CG33223-PA | 1..555 | 17..571 | 2775 | 100 | Plus |
| CG32713-RB | 555 | CG32713-PB | 1..555 | 17..571 | 2640 | 98.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:38:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33223-RB | 689 | CG33223-RB | 67..621 | 17..571 | 2775 | 100 | Plus |
| CG33223-RA | 1114 | CG33223-RA | 492..1046 | 17..571 | 2775 | 100 | Plus |
| CG32713-RB | 796 | CG32713-RB | 73..627 | 17..571 | 2640 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:38:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8465758..8466312 | 571..17 | 2775 | 100 | Minus |
| X | 23542271 | X | 8457006..8457560 | 571..17 | 2640 | 98.4 | Minus |
| X | 23542271 | X | 13402370..13402714 | 346..17 | 810 | 84.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:38:53 has no hits.
BS32338.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 09:59:38 Download gff for
BS32338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33223-RA | 492..1038 | 17..563 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:11:02 Download gff for
BS32338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33223-RA | 492..1038 | 17..563 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:31:55 Download gff for
BS32338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33223-RA | 492..1038 | 17..563 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:31:55 Download gff for
BS32338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8465766..8466312 | 17..563 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:11:02 Download gff for
BS32338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8359799..8360345 | 17..563 | 100 | | Minus |
BS32338.pep Sequence
Translation from 16 to 570
> BS32338.pep
MRKVQALVQTRDGKKTVYEVDRLGTVASLKARIGQAMSVPMGFSRLSYKG
RVLSNQSVLEDLGPNKSTLDLTWKPVVLTANQSSKLSKFGYGRIDDSEVM
FTLIGGYQQREEYPGGIVNPPDDESQQNFNAGDDDDALEAQDMTGHDLSS
IQTDDLSLKGQTEPELDCSIGSHGFSGSQEEGQE*
BS32338.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33223-PB | 184 | CG33223-PB | 1..184 | 1..184 | 945 | 100 | Plus |
| CG33223-PA | 184 | CG33223-PA | 1..184 | 1..184 | 945 | 100 | Plus |
| CG32713-PB | 184 | CG32713-PB | 1..184 | 1..184 | 923 | 97.3 | Plus |
| CG32713-PA | 184 | CG32713-PA | 1..184 | 1..184 | 923 | 97.3 | Plus |
| CG12725-PA | 163 | CG12725-PA | 1..162 | 1..178 | 461 | 60.3 | Plus |
