BS32340.complete Sequence
908 bp assembled on 2013-05-22
> BS32340.complete
GAAGTTATCAGTCGACATGCTCAACTCTTTGGCCAAGAGAATTGTGCTTA
TGCCCAGCCTTATAGCACTGGAGGATACTTGTCGAACTATTCACGTTACC
GCCCTAATGGCGAGGATGGGAAAGGATTTCTGTCCCGTGAGTGAGGTTCC
CGACTGCAAAGTGGTGAAGAAGCGACCGTGCAGTCCCACGGATCCACCTG
TTCGTCCTTGCAGCGAGGAGGGCTGCACCCAGCCGCGATACTCATGTTGC
GTGAGTACCGGCATTTCGGCGAATCCATGCGCTGATCCAAGCAAGAAGAC
CAAGTTCGTTTCGATGTGGAAGAGATACAAGGATGATGGTAGTAATCGGC
CAGAAGCTATGTGGCACTACCCGGAGGAGTGCTGTCCAAAGTGTGAGGAT
ACGCGATTTGACGTTTTGTACTATACACCGTCGGACAAGTGCCGGGAGTT
CCAGCGCACCTGGTGGGAATGCTGTCCAAAAATGGTACCGAAGCGGGTCT
GCTGCTGGTGCGACGCCATTCCACCGGAGGTCCTGCGGCGAGATTTGCCC
ATCTGCCCGCGATCCGCTTGTCTCGCAGAACATGAGAGGAAGCGCTATAA
GTGCCTAAACAAAAGGTACAAAGGTTGCATGCGTATCCGTATGCCGTGTT
GTCGAACCGCTCGAATACCGCCCGACTGCAGGGCATTCCCCGGTCCTTCC
GATTGCGAGAAGATCAAGTGCCCGTTCCCGAGTTACTCCGAATGCGTTCA
GGAGGATCCCGCTGTTATCCCAACCCGGCCACCAGAGTGTGAGTGCTTGA
AAAAGGCGTCTCAGTGCGAGCAGATCCGACGAGGACGGCACATGGAAAAC
AACGACATAAGCATCTGGCCGTGTACTTCCAGGGGAAGATGAAAGCTTTC
TAGACCAT
BS32340.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:38:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hubl-RB | 876 | CG30364-PB | 1..876 | 17..892 | 4380 | 100 | Plus |
| hubl-RA | 876 | CG30364-PA | 1..876 | 17..892 | 4380 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:38:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spaw-RB | 2691 | CG30365-RB | 57..934 | 16..893 | 4390 | 100 | Plus |
| hubl-RB | 2691 | CG30364-RB | 57..934 | 16..893 | 4390 | 100 | Plus |
| hubl-RA | 1061 | CG30364-RA | 57..934 | 16..893 | 4390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:38:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8361223..8362100 | 893..16 | 4390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:38:57 has no hits.
BS32340.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 09:59:40 Download gff for
BS32340.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hubl-RA | 58..932 | 17..891 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:11:05 Download gff for
BS32340.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spaw-RB | 58..932 | 17..891 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:31:57 Download gff for
BS32340.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hubl-RA | 58..932 | 17..891 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:31:57 Download gff for
BS32340.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8361225..8362099 | 17..891 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:11:05 Download gff for
BS32340.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4248730..4249604 | 17..891 | 100 | | Minus |
BS32340.pep Sequence
Translation from 16 to 891
> BS32340.pep
MLNSLAKRIVLMPSLIALEDTCRTIHVTALMARMGKDFCPVSEVPDCKVV
KKRPCSPTDPPVRPCSEEGCTQPRYSCCVSTGISANPCADPSKKTKFVSM
WKRYKDDGSNRPEAMWHYPEECCPKCEDTRFDVLYYTPSDKCREFQRTWW
ECCPKMVPKRVCCWCDAIPPEVLRRDLPICPRSACLAEHERKRYKCLNKR
YKGCMRIRMPCCRTARIPPDCRAFPGPSDCEKIKCPFPSYSECVQEDPAV
IPTRPPECECLKKASQCEQIRRGRHMENNDISIWPCTSRGR*
BS32340.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hubl-PB | 291 | CG30364-PB | 1..291 | 1..291 | 1676 | 100 | Plus |
| hubl-PA | 291 | CG30364-PA | 1..291 | 1..291 | 1676 | 100 | Plus |
| swif-PB | 284 | CG30366-PB | 37..279 | 54..272 | 293 | 31 | Plus |
| swif-PA | 284 | CG30366-PA | 37..279 | 54..272 | 293 | 31 | Plus |
| CG2127-PB | 289 | CG2127-PB | 51..267 | 66..268 | 258 | 33.6 | Plus |
