Clone BS32345 Report

Search the DGRC for BS32345

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:323
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG43121-RA
Protein status:BS32345.pep: gold
Sequenced Size:386

Clone Sequence Records

BS32345.complete Sequence

386 bp assembled on 2013-05-22

> BS32345.complete
GAAGTTATCAGTCGACATGCTTTCCCCGGAGTCTCCGGAGAAACCGAAAA
AAAGTCTACATGACCTCGGGCTATTAACAAAGACTGAAGAGAAAACCAAA
GGGAGCCTTGTAGCCCTCCAGTCTATCGACAAGCGCCTGAAGACCCTCTT
GGACCGCCTTACATCTGTGGAGAACTCAATGGCTAGCTTGAATTTACCTG
CTTTGGACGAAGGTAATGGAGACACCTATGAGGACTTGGAAACATTGGAG
GATGAGTTGGACAACCAGGAGAAAGAACTTTCAGAATTTGCAAATGAAGA
AGCTATTGGGTCAAAGGTAGATGATGATGAAATTGAAGAGGTAGACAAGG
AAGTCACAGGAAATCAATAAAAGCTTTCTAGACCAT

BS32345.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:39:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG43121-RA 354 CG43121-PA 1..354 17..370 1770 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:39:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG43121-RA 503 CG43121-RA 38..391 17..370 1770 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:39:32
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14672047..14672400 370..17 1770 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:39:33 has no hits.

BS32345.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 09:59:52 Download gff for BS32345.complete
Subject Subject Range Query Range Percent Splice Strand
CG43121-RA 38..389 17..368 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:11:21 Download gff for BS32345.complete
Subject Subject Range Query Range Percent Splice Strand
CG43121-RA 38..389 17..368 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:32:11 Download gff for BS32345.complete
Subject Subject Range Query Range Percent Splice Strand
CG43121-RA 38..389 17..368 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:32:11 Download gff for BS32345.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14672049..14672400 17..368 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:11:21 Download gff for BS32345.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14665149..14665500 17..368 100   Minus

BS32345.pep Sequence

Translation from 16 to 369

> BS32345.pep
MLSPESPEKPKKSLHDLGLLTKTEEKTKGSLVALQSIDKRLKTLLDRLTS
VENSMASLNLPALDEGNGDTYEDLETLEDELDNQEKELSEFANEEAIGSK
VDDDEIEEVDKEVTGNQ*

BS32345.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:17:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG43121-PA 117 CG43121-PA 1..117 1..117 582 100 Plus