Clone BS32349 Report

Search the DGRC for BS32349

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:323
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG18508-RA
Protein status:BS32349.pep: full length peptide match
Sequenced Size:332

Clone Sequence Records

BS32349.complete Sequence

332 bp assembled on 2013-05-22

> BS32349.complete
GAAGTTATCAGTCGACATGGTTTGCGTGCCCTGTATTATCATTCCACTGC
TTCTGTACATTTGGCACAAATTTGTGCAGCCGATCCTGTTGCGCTACTGG
AATCCCTGGGAGAAGAAGGACGACGATGGCAATGTGATCAAAAAGGGACC
CGACTTCCCATTCGAGTGCAAGGGCGGCGTTTGCCCCTTCGTTCCGGGCG
GCAAGAAGACGGAGAACGTCAGTGATGACGATGCCGAGGAATCTGAAAAT
CCGCCATTGAATGCAACAGCAATGGCAGCGGAAACGGAAGTGGACGAGTC
CAAGAAGGAGATCTAGAAGCTTTCTAGACCAT

BS32349.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:42:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG18508-RB 300 CG18508-PB 1..300 17..316 1500 100 Plus
CG18508-RA 300 CG18508-PA 1..300 17..316 1500 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:42:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG18508-RB 816 CG18508-RB 105..404 17..316 1500 100 Plus
CG18508-RA 630 CG18508-RA 105..404 17..316 1500 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:42:31
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 3172680..3172979 316..17 1500 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:42:32 has no hits.

BS32349.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:55 Download gff for BS32349.complete
Subject Subject Range Query Range Percent Splice Strand
CG18508-RA 104..403 17..316 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:49 Download gff for BS32349.complete
Subject Subject Range Query Range Percent Splice Strand
CG18508-RA 105..404 17..316 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:17 Download gff for BS32349.complete
Subject Subject Range Query Range Percent Splice Strand
CG18508-RA 105..404 17..316 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:17 Download gff for BS32349.complete
Subject Subject Range Query Range Percent Splice Strand
X 3172680..3172979 17..316 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:49 Download gff for BS32349.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 3066713..3067012 17..316 100   Minus

BS32349.pep Sequence

Translation from 16 to 315

> BS32349.pep
MVCVPCIIIPLLLYIWHKFVQPILLRYWNPWEKKDDDGNVIKKGPDFPFE
CKGGVCPFVPGGKKTENVSDDDAEESENPPLNATAMAAETEVDESKKEI*

BS32349.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG18508-PB 99 CG18508-PB 1..99 1..99 550 100 Plus
CG18508-PA 99 CG18508-PA 1..99 1..99 550 100 Plus