BS32353.complete Sequence
833 bp assembled on 2013-05-22
> BS32353.complete
GAAGTTATCAGTCGACATGTGGTATTCAACGGTTAGGAACCCAAGTATTG
CCCTCATCAAACAGGGCTACCATATTCTCGCCGAATACAATCTGGTGAAG
GAAGAGCTAAAGAACATCTATGCCATACCCAGTTACGCTTGTGGATTGCA
CTGGTTCGGCGTCATCTTTGTGCACAGTGGAATCTATGCGGGCAGCGTGT
TTCGCTTCTCCATTCTGCTGCCGGAAAATTTTCCGGCGGACATCAGCCTG
CCCACGGTGGTCTTCTCGACGGAGGTCCTACATCCGCACATCTGTCCGCA
GAATAAGACCCTCGATCTGGCGCATTTCCTGAACGAGTGGCGCAAGGATG
AGCACCACATCTGGCACGTGCTTCGCTATATCCAGGCTATTTTCGCGGAT
CCAGAGGGCAGTATTTGCACCGGACAATCCTCTTCGGGGGATCTCGTGAT
CATGGATGAGGTTAGAAACATGAATGCCTTGAATATGTTGGCCAAAAGCC
GGCCTGAATACATCAAACGAGTCCAGGAGCAAGCAATCTTGTCGAGAAAT
CTTATCTACGACCGACCACCAACGGAAGATCCGCACTATATTATCGTGGA
GCCCTATTGTGCGGAACGGCATCTGAAGTTCATGGACCAACTGAAGAGTC
CCTGTTGGAAGGAGGCCACTTCCATGGACTGCTCCCAGCCGTCGGAGTAC
CTGGGACACATCGATTCCTCGAGGCAGCTGGACGAGGAAGAGGCGAATCA
GGTGGAGAAGCTACATCGCGGACGTATTCCGGAACACCAGCGTGAAGAGT
CGGAAGTTTCCCTGTAGAAGCTTTCTAGACCAT
BS32353.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:42:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16894-RA | 801 | CG16894-PA | 1..801 | 17..817 | 4005 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:42:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16894-RA | 1035 | CG16894-RA | 133..934 | 16..817 | 4010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:42:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20211686..20212487 | 817..16 | 4010 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:42:19 has no hits.
BS32353.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:50 Download gff for
BS32353.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16894-RA | 134..934 | 17..817 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:43 Download gff for
BS32353.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16894-RA | 134..934 | 17..817 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:12 Download gff for
BS32353.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16894-RA | 134..934 | 17..817 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:12 Download gff for
BS32353.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20211686..20212486 | 17..817 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:43 Download gff for
BS32353.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16099191..16099991 | 17..817 | 100 | | Minus |
BS32353.pep Sequence
Translation from 16 to 816
> BS32353.pep
MWYSTVRNPSIALIKQGYHILAEYNLVKEELKNIYAIPSYACGLHWFGVI
FVHSGIYAGSVFRFSILLPENFPADISLPTVVFSTEVLHPHICPQNKTLD
LAHFLNEWRKDEHHIWHVLRYIQAIFADPEGSICTGQSSSGDLVIMDEVR
NMNALNMLAKSRPEYIKRVQEQAILSRNLIYDRPPTEDPHYIIVEPYCAE
RHLKFMDQLKSPCWKEATSMDCSQPSEYLGHIDSSRQLDEEEANQVEKLH
RGRIPEHQREESEVSL*
BS32353.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16894-PA | 266 | CG16894-PA | 1..266 | 1..266 | 1426 | 100 | Plus |
cbx-PB | 244 | CG10536-PB | 16..209 | 11..211 | 492 | 45.5 | Plus |
cbx-PA | 214 | CG10536-PA | 5..179 | 29..211 | 457 | 45.4 | Plus |
cbx-PC | 183 | CG10536-PC | 5..148 | 29..211 | 360 | 39.9 | Plus |