Clone BS32353 Report

Search the DGRC for BS32353

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:323
Well:53
Vector:pDNR-Dual
Associated Gene/TranscriptCG16894-RA
Protein status:BS32353.pep: full length peptide match
Sequenced Size:833

Clone Sequence Records

BS32353.complete Sequence

833 bp assembled on 2013-05-22

> BS32353.complete
GAAGTTATCAGTCGACATGTGGTATTCAACGGTTAGGAACCCAAGTATTG
CCCTCATCAAACAGGGCTACCATATTCTCGCCGAATACAATCTGGTGAAG
GAAGAGCTAAAGAACATCTATGCCATACCCAGTTACGCTTGTGGATTGCA
CTGGTTCGGCGTCATCTTTGTGCACAGTGGAATCTATGCGGGCAGCGTGT
TTCGCTTCTCCATTCTGCTGCCGGAAAATTTTCCGGCGGACATCAGCCTG
CCCACGGTGGTCTTCTCGACGGAGGTCCTACATCCGCACATCTGTCCGCA
GAATAAGACCCTCGATCTGGCGCATTTCCTGAACGAGTGGCGCAAGGATG
AGCACCACATCTGGCACGTGCTTCGCTATATCCAGGCTATTTTCGCGGAT
CCAGAGGGCAGTATTTGCACCGGACAATCCTCTTCGGGGGATCTCGTGAT
CATGGATGAGGTTAGAAACATGAATGCCTTGAATATGTTGGCCAAAAGCC
GGCCTGAATACATCAAACGAGTCCAGGAGCAAGCAATCTTGTCGAGAAAT
CTTATCTACGACCGACCACCAACGGAAGATCCGCACTATATTATCGTGGA
GCCCTATTGTGCGGAACGGCATCTGAAGTTCATGGACCAACTGAAGAGTC
CCTGTTGGAAGGAGGCCACTTCCATGGACTGCTCCCAGCCGTCGGAGTAC
CTGGGACACATCGATTCCTCGAGGCAGCTGGACGAGGAAGAGGCGAATCA
GGTGGAGAAGCTACATCGCGGACGTATTCCGGAACACCAGCGTGAAGAGT
CGGAAGTTTCCCTGTAGAAGCTTTCTAGACCAT

BS32353.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:42:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG16894-RA 801 CG16894-PA 1..801 17..817 4005 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:42:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG16894-RA 1035 CG16894-RA 133..934 16..817 4010 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:42:18
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20211686..20212487 817..16 4010 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:42:19 has no hits.

BS32353.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:50 Download gff for BS32353.complete
Subject Subject Range Query Range Percent Splice Strand
CG16894-RA 134..934 17..817 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:43 Download gff for BS32353.complete
Subject Subject Range Query Range Percent Splice Strand
CG16894-RA 134..934 17..817 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:12 Download gff for BS32353.complete
Subject Subject Range Query Range Percent Splice Strand
CG16894-RA 134..934 17..817 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:12 Download gff for BS32353.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20211686..20212486 17..817 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:43 Download gff for BS32353.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16099191..16099991 17..817 100   Minus

BS32353.pep Sequence

Translation from 16 to 816

> BS32353.pep
MWYSTVRNPSIALIKQGYHILAEYNLVKEELKNIYAIPSYACGLHWFGVI
FVHSGIYAGSVFRFSILLPENFPADISLPTVVFSTEVLHPHICPQNKTLD
LAHFLNEWRKDEHHIWHVLRYIQAIFADPEGSICTGQSSSGDLVIMDEVR
NMNALNMLAKSRPEYIKRVQEQAILSRNLIYDRPPTEDPHYIIVEPYCAE
RHLKFMDQLKSPCWKEATSMDCSQPSEYLGHIDSSRQLDEEEANQVEKLH
RGRIPEHQREESEVSL*

BS32353.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG16894-PA 266 CG16894-PA 1..266 1..266 1426 100 Plus
cbx-PB 244 CG10536-PB 16..209 11..211 492 45.5 Plus
cbx-PA 214 CG10536-PA 5..179 29..211 457 45.4 Plus
cbx-PC 183 CG10536-PC 5..148 29..211 360 39.9 Plus