Clone BS32354 Report

Search the DGRC for BS32354

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:323
Well:54
Vector:pDNR-Dual
Associated Gene/TranscriptCG5050-RA
Protein status:BS32354.pep: full length peptide match
Sequenced Size:1016

Clone Sequence Records

BS32354.complete Sequence

1016 bp assembled on 2013-05-22

> BS32354.complete
GAAGTTATCAGTCGACATGGATAGACAAGGTGTTCATAATAGCTATGGGT
CAATAGCGAAAGACGCAATAGATGAGCAACGGATGGTGCTATCGATGCCA
CAACTGTCCATCCAGAGGAAATCCGTTACAAGCATGAAGTTATTCACCAT
GGTGGTGTTGCACTCGTGGCGCCAACGCCGAAAGGAGGTTCGTGAACTCA
AAGAGATGGTGCAACACCTCCAGGATAGCTCCATGAAGACCAAAAACGAA
CTGCACGTATGTGGCACATTGATGCGTGTGGAGGAAAAACGAAACAGGGA
ACTTCAAATAAAGCTTAAGCTATCGACGATGAGCATTGACCAAGTAAGGT
CCTCCTGTGAATCTCTTGTCAACTCGGTCCGTGACCTCACAACAGAGAAA
AGGCGATTGGAAACCGATTTGGAACAGCGCTTGCAGGAGTACAATGAGCT
GGAGGAAGTATCTGACAAAACCAAACGGCTGCTCTTCAGCGCCTACGTGG
AACAATCTAGCCTGCAAAAGCAACTAGCTGAGGAGCAGCGTACGACGCAG
AGATTGCAGGCGGAAAAGGACCAGCTAATCCAGGAAGTGATACTGGCGGA
GGGCAGAGATAACAAGTACCGCCAGGTGCGGGAATGGTACCAGCGTGTAC
TGCACAAAAAGGAGGTGTGCATTTACAACCTGGGAAGGAGATTGCATATG
CTGGAGGAGCAACTGTTTGACATTAATGAGCACACTGGAGAATTGGAACA
ATTGCGTGAGAGTGCTCAACAAATGTCGAACGAAATCACAGAGTTGCGCC
AGGAGATCAACCGAAATCGCAACGGTGTCTTCGGTGATTCCTGCTGTCGC
CTCGGACTCGGACGCCTCCACGACCATGTGATTGCGCCCTTTCAAGGCAA
CCATATCTGGATAAAACTTCGACGCTATTCCTTTAACGTGATATATTTGT
TTGCTTTGTATCTGCTGCCTGGAATGTCTCTCAAATATCGTCAAAACTAA
AAGCTTTCTAGACCAT

BS32354.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:42:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG5050-RB 984 CG5050-PB 1..984 17..1000 4920 100 Plus
CG5050-RA 984 CG5050-PA 1..984 17..1000 4920 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:42:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG5050-RB 1139 CG5050-RB 127..1111 17..1001 4925 100 Plus
CG5050-RA 1314 CG5050-RA 302..1286 17..1001 4925 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:42:12
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 17453882..17454174 438..730 1465 100 Plus
2L 23513712 2L 17458476..17458747 730..1001 1360 100 Plus
2L 23513712 2L 17453225..17453437 17..229 1065 100 Plus
2L 23513712 2L 17453515..17453724 230..439 1050 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:42:15 has no hits.

BS32354.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:48 Download gff for BS32354.complete
Subject Subject Range Query Range Percent Splice Strand
CG5050-RA 232..1207 17..992 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:42 Download gff for BS32354.complete
Subject Subject Range Query Range Percent Splice Strand
CG5050-RA 302..1277 17..992 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:12 Download gff for BS32354.complete
Subject Subject Range Query Range Percent Splice Strand
CG5050-RA 302..1277 17..992 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:12 Download gff for BS32354.complete
Subject Subject Range Query Range Percent Splice Strand
2L 17453225..17453437 17..229 100 -> Plus
2L 17453515..17453724 230..439 100 -> Plus
2L 17453884..17454173 440..729 100 -> Plus
2L 17458476..17458738 730..992 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:42 Download gff for BS32354.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 17453225..17453437 17..229 100 -> Plus
arm_2L 17453515..17453724 230..439 100 -> Plus
arm_2L 17453884..17454173 440..729 100 -> Plus
arm_2L 17458476..17458738 730..992 100   Plus

BS32354.pep Sequence

Translation from 16 to 999

> BS32354.pep
MDRQGVHNSYGSIAKDAIDEQRMVLSMPQLSIQRKSVTSMKLFTMVVLHS
WRQRRKEVRELKEMVQHLQDSSMKTKNELHVCGTLMRVEEKRNRELQIKL
KLSTMSIDQVRSSCESLVNSVRDLTTEKRRLETDLEQRLQEYNELEEVSD
KTKRLLFSAYVEQSSLQKQLAEEQRTTQRLQAEKDQLIQEVILAEGRDNK
YRQVREWYQRVLHKKEVCIYNLGRRLHMLEEQLFDINEHTGELEQLRESA
QQMSNEITELRQEINRNRNGVFGDSCCRLGLGRLHDHVIAPFQGNHIWIK
LRRYSFNVIYLFALYLLPGMSLKYRQN*

BS32354.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG5050-PB 327 CG5050-PB 1..327 1..327 1666 100 Plus
CG5050-PA 327 CG5050-PA 1..327 1..327 1666 100 Plus
CG5043-PA 499 CG5043-PA 198..358 33..193 236 31.1 Plus