Clone BS32355 Report

Search the DGRC for BS32355

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:323
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptMst77F-RA
Protein status:BS32355.pep: full length peptide match
Sequenced Size:680

Clone Sequence Records

BS32355.complete Sequence

680 bp assembled on 2013-05-22

> BS32355.complete
GAAGTTATCAGTCGACATGAGTAATCTGAAACAAAAGGATAGCAAGCCGG
AGGTGGCAGTAACAAAATCAGTGAAAACCTATAAAAAATCAATTGAATAT
GTTAATTCCGACGCCTCCGACATTGAAGAAGATATCAATAGGGCAGAGGA
CGAATACGCCTCATCGTCTGGCTTTGTTAATTTTCTGAGGGACTTTAAGA
AGCGCTACGGAGAATATTACTCGAATAACGAGATAAGACGGGCTGCTGAA
ACCCGATGGAACGAAATGTCATTCCGTCATCGATGCCAGTATTCTGCGGA
ACCATTGGACACTTTTCATGTAGAGCCCAACAGTGTGAGCAGTCTTCAGC
GTTCTAGTGAGGGCGAGCACAGAATGCACTCTGAAATAAGTGGCTGCGCA
GACACTTTCTTCGGTGCCGGTGGCTCCAATAGCTGCACTCCAAGAAAGGA
GAACAAGTGTTCCAAGCCCAGGGTGCGGAAGAGTTGCCCCAAACCACGGG
CGAAAACCTCGAAGCAACGTCGCAGTTGCGGCAAACCGAAGCCCAAGGGC
GCCCGACCCCGGAAGGCATGTCCCCGCCCCAGGAAGAAGATGGAATGCGG
CAAGGCGAAGGCAAAGCCAAGGTGTCTTAAGCCCAAGAGCTCCAAGCCCA
AGTGCTCGATGTAAAAGCTTTCTAGACCAT

BS32355.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:42:10
Subject Length Description Subject Range Query Range Score Percent Strand
Mst77F-RA 648 CG3354-PA 1..648 17..664 3240 100 Plus
Mst77Y-9-RA 645 CG45769-PA 1..645 17..664 2440 92.1 Plus
CG45764-RA 645 CG45764-PA 1..645 17..664 2440 92.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:42:11
Subject Length Description Subject Range Query Range Score Percent Strand
Mst77F-RA 1065 CG3354-RA 150..797 17..664 3240 100 Plus
Mst77Y-9-RA 660 CG45769-RA 16..660 17..664 2440 92.1 Plus
CG45764-RA 942 CG45764-RA 147..791 17..664 2440 92.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:42:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20817169..20817535 664..298 1835 100 Minus
3L 28110227 3L 20817596..20817878 299..17 1415 100 Minus
Y 3667352 Y 3341184..3341546 298..664 1390 93.2 Plus
Y 3667352 Y 3371242..3371602 300..664 1380 93.2 Plus
Ymm 880023 Ymm 515756..516116 664..300 1380 93.2 Minus
Y 3667352 Y 3289701..3290064 298..664 1365 92.1 Plus
Y 3667352 Y 3358926..3359286 300..664 1365 92.9 Plus
Y 3667352 Y 3285354..3285717 298..664 1350 91.8 Plus
Y 3667352 Y 3302187..3302550 298..664 1350 91.8 Plus
Y 3667352 Y 3336760..3337123 298..664 1350 91.8 Plus
Y 3667352 Y 3332337..3332699 298..664 1345 92.4 Plus
Y 3667352 Y 3293966..3294329 298..664 1335 91.6 Plus
Y 3667352 Y 3350011..3350374 298..664 1335 91.6 Plus
Y 3667352 Y 3354465..3354828 298..664 1335 91.6 Plus
Y 3667352 Y 3297764..3298126 298..664 1330 92.1 Plus
Y 3667352 Y 3327916..3328279 298..664 1320 91.3 Plus
Y 3667352 Y 3319090..3319442 298..664 1150 88.8 Plus
Y 3667352 Y 3323503..3323855 298..664 1150 88.8 Plus
Y 3667352 Y 3336415..3336697 17..299 1100 92.6 Plus
Y 3667352 Y 3289355..3289637 17..299 1085 92.2 Plus
Y 3667352 Y 3293621..3293903 17..299 1085 92.2 Plus
Y 3667352 Y 3301842..3302124 17..299 1085 92.2 Plus
Y 3667352 Y 3318745..3319027 17..299 1085 92.2 Plus
Y 3667352 Y 3323158..3323440 17..299 1085 92.2 Plus
Y 3667352 Y 3327571..3327853 17..299 1085 92.2 Plus
Y 3667352 Y 3349666..3349948 17..299 1085 92.2 Plus
Y 3667352 Y 3354120..3354402 17..299 1085 92.2 Plus
Y 3667352 Y 3358586..3358868 17..299 1085 92.2 Plus
Y 3667352 Y 3370902..3371184 17..299 1085 92.2 Plus
Ymm 880023 Ymm 516174..516456 299..17 1085 92.2 Minus
Y 3667352 Y 3297419..3297701 17..299 1055 91.5 Plus
Y 3667352 Y 3340839..3341121 17..299 1055 91.5 Plus
Y 3667352 Y 3345262..3345544 17..299 1055 91.5 Plus
Y 3667352 Y 3376297..3376579 17..299 1025 90.8 Plus
Y 3667352 Y 3345663..3345950 374..664 1015 90.7 Plus
Y 3667352 Y 3285012..3285291 17..299 1005 91.2 Plus
Y 3667352 Y 3331995..3332274 17..299 1005 91.2 Plus
Y 3667352 Y 3364784..3365046 402..664 1000 92 Plus
Y 3667352 Y 3376698..3376984 374..664 980 90.7 Plus
Y 3667352 Y 3364536..3364742 17..226 715 90.5 Plus
Ymm 880023 Ymm 579088..579274 664..477 650 91 Minus
U 3151297 U 1324257..1324400 158..17 410 88.9 Minus
U 3151297 U 973485..973559 664..590 330 96 Minus
Blast to na_te.dros performed on 2014-11-28 13:42:09 has no hits.

BS32355.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:47 Download gff for BS32355.complete
Subject Subject Range Query Range Percent Splice Strand
Mst77F-RA 173..818 17..662 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:39 Download gff for BS32355.complete
Subject Subject Range Query Range Percent Splice Strand
Mst77F-RA 150..795 17..662 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:10 Download gff for BS32355.complete
Subject Subject Range Query Range Percent Splice Strand
Mst77F-RA 150..795 17..662 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:10 Download gff for BS32355.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20817171..20817534 299..662 100 <- Minus
3L 20817597..20817878 17..298 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:39 Download gff for BS32355.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20810271..20810634 299..662 100 <- Minus
arm_3L 20810697..20810978 17..298 100   Minus

BS32355.pep Sequence

Translation from 16 to 663

> BS32355.pep
MSNLKQKDSKPEVAVTKSVKTYKKSIEYVNSDASDIEEDINRAEDEYASS
SGFVNFLRDFKKRYGEYYSNNEIRRAAETRWNEMSFRHRCQYSAEPLDTF
HVEPNSVSSLQRSSEGEHRMHSEISGCADTFFGAGGSNSCTPRKENKCSK
PRVRKSCPKPRAKTSKQRRSCGKPKPKGARPRKACPRPRKKMECGKAKAK
PRCLKPKSSKPKCSM*

BS32355.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:04
Subject Length Description Subject Range Query Range Score Percent Strand
Mst77F-PA 215 CG3354-PA 1..215 1..215 1152 100 Plus
Mst77Y-9-PA 214 CG45769-PA 1..214 1..215 1000 88.4 Plus
CG45766-PA 214 CG45766-PA 1..214 1..215 994 87.9 Plus
CG45764-PA 214 CG45764-PA 1..214 1..215 994 87.9 Plus
CG45770-PA 214 CG45770-PA 1..214 1..215 985 87 Plus