BS32358.complete Sequence
680 bp assembled on 2013-05-22
> BS32358.complete
GAAGTTATCAGTCGACATGGCATCCGCTACGGTGCCGCTGCTCGACGATG
ACACGATACCCTTTGGCGAGGAGGACGAGATGCGGGATCCCAGTCGCGCG
GGTCAGAAATACACGCACCCGTACGTCACCTTCTTCCACCTGTTCTTCAG
GGGCGCCGCCATCCTGATCTATATGTTCTGCGGTTGGTTCAGCGACTCCT
TCATCACCAGCTTCGTTTTCGTGGTGCTCTTCCTGTCCGCCGACTTCTGG
ACGGTGAAGAACATCTCGGGCAGATTGCTGGTGGGTCTCCGCTGGTGGAA
CTACGTCGACGACGATGGCGTATCGCACTGGGTGTTTGAGTCAAAGAACA
GTCGGGTCAACAAGAACGAGCAGCGCATCTTCTGGCTGGGACTCATCCTC
TGTCCCGTCTTCTGGGGCCTCTTCTTCCTGTTCGCCCTATTCGGCCTGAA
GTTCAAATGGCTACTGCTGGTAATGATCGCCATTGCGCTGAATGCCGCCA
ATCTGTATGGCTACGTCAAGTGTAACTATGGCGCCAATAAGGATCTGAAT
TCCGCCGCCACAGACTTTGTGAAAACGCAGTTCTTCAAGAATGCCGTGGA
CATCATGACAAGGCCCAGTGGCGCCCCACCGCCCACAAATGTACGCCCGA
CGGGAGTCGTTTGAAAGCTTTCTAGACCAT
BS32358.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:39:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5021-RB | 648 | CG5021-PB | 1..648 | 17..664 | 3195 | 99.5 | Plus |
CG5021-RA | 657 | CG5021-PA | 25..657 | 32..664 | 3120 | 99.5 | Plus |
CG5021-RD | 663 | CG5021-PD | 1..663 | 17..664 | 3010 | 97.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:39:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5021-RB | 1007 | CG5021-RB | 140..788 | 16..664 | 3200 | 99.5 | Plus |
CG5021-RA | 933 | CG5021-RA | 165..797 | 32..664 | 3120 | 99.5 | Plus |
CG5021-RD | 1022 | CG5021-RD | 140..803 | 16..664 | 3015 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:39:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8967581..8967895 | 350..664 | 1545 | 99.4 | Plus |
3L | 28110227 | 3L | 8967278..8967516 | 111..349 | 1165 | 99.2 | Plus |
3L | 28110227 | 3L | 8967127..8967211 | 31..115 | 425 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:39:42 has no hits.
BS32358.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 09:59:56 Download gff for
BS32358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5021-RB | 130..776 | 17..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:11:25 Download gff for
BS32358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5021-RB | 141..787 | 17..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:32:15 Download gff for
BS32358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5021-RB | 141..787 | 17..663 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:32:15 Download gff for
BS32358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8967128..8967210 | 32..114 | 100 | -> | Plus |
3L | 8967282..8967516 | 115..349 | 99 | -> | Plus |
3L | 8967581..8967894 | 350..663 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:11:25 Download gff for
BS32358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8960228..8960310 | 32..114 | 100 | -> | Plus |
arm_3L | 8960382..8960616 | 115..349 | 99 | -> | Plus |
arm_3L | 8960681..8960994 | 350..663 | 99 | | Plus |
BS32358.pep Sequence
Translation from 16 to 663
> BS32358.pep
MASATVPLLDDDTIPFGEEDEMRDPSRAGQKYTHPYVTFFHLFFRGAAIL
IYMFCGWFSDSFITSFVFVVLFLSADFWTVKNISGRLLVGLRWWNYVDDD
GVSHWVFESKNSRVNKNEQRIFWLGLILCPVFWGLFFLFALFGLKFKWLL
LVMIAIALNAANLYGYVKCNYGANKDLNSAATDFVKTQFFKNAVDIMTRP
SGAPPPTNVRPTGVV*
BS32358.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:17:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5021-PB | 215 | CG5021-PB | 1..215 | 1..215 | 1161 | 100 | Plus |
CG5021-PA | 218 | CG5021-PA | 1..218 | 1..215 | 1147 | 98.6 | Plus |
CG5021-PD | 220 | CG5021-PD | 1..220 | 1..215 | 1145 | 97.7 | Plus |
CG5021-PC | 223 | CG5021-PC | 1..223 | 1..215 | 1131 | 96.4 | Plus |