Clone BS32359 Report

Search the DGRC for BS32359

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:323
Well:59
Vector:pDNR-Dual
Associated Gene/TranscriptCG15482-RA
Protein status:BS32359.pep: full length peptide match
Sequenced Size:962

Clone Sequence Records

BS32359.complete Sequence

962 bp assembled on 2013-05-22

> BS32359.complete
GAAGTTATCAGTCGACATGACTGCGCCATTTACCTCGCGTACCAACCAGG
CCGCCGATTCCGGCAAAGATCAATCTCCCATCCATGGATTGAGCCGGAAT
CGAAAGCGTCAGGAGAGGCGAAAGCAGCGCCTGCAGGAAATGCAAGATTT
GCTGTACACGAAACACTTTTCCAACTACAGACTGCCGGCATCGGTGGCCG
CGCCAGCTCCCGAGGATCAGCTGCTCCTCAAACTGCAGAACTTCGAATCG
CTGACCGAGCAGCCGTCCAGCAGCAGGAAGAGCACTGCGACCACATCTAG
CGATTCGCCGTGGAGCCGACTGCGCCTGGTGGCATGCCCATGTCACGGAT
GCCTATGCTCGGTTGACCCCAGCGCTCTGTTGGGTCACTATTTGAGTGAC
CATCTGCCGGGAATGGGAGTTCCGTTTTATGAACTGGAAATGGGCAAGCG
AGTGTCACTAACATGTCATATTAGTAGCCTGGAAAGAGATGTCAACACCC
TGCTGGGGGTCTATGGCTATCGGCGCACTGGCCTTAATCCTCTGAAATGT
CACCGAAACACCCATCTGCCAGTGGAGTACCGCCGCTTCTCGCAGCATAG
CGCCCTTATGATCTTCGCCTGCCGCACCATGCACTCGGTGCTGTGGGAAA
GGAAGCGTGTCAAACACGAAGTCCTGGCCATCTGGGTGGCTACTCCTTTG
CACGGCGTGGCCATCACTCTGCGCCTGCTGGTCCAACCTGCCAACCTGCC
ACGTTACTACACCAGACAGATAAAAGCTCGTCCAATGCTGCCACTGTCGT
CGAACCAATCCTGCAGTGAGTTCATCAAGACCGACAGCAACGTGATCCTC
ATCAGCTTGAATGACCTCCGGCCACTAATGGATTTAGATGTTTGGCAGCA
ATCGCTAACCGTCGAACTGAAAGTGATTAGCGAGGCAAGTATATAAAAGC
TTTCTAGACCAT

BS32359.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:42:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG15482-RA 930 CG15482-PA 1..930 17..946 4650 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:42:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG15482-RA 1042 CG15482-RA 34..965 17..948 4660 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:42:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13210850..13211781 948..17 4660 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:42:43 has no hits.

BS32359.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:59 Download gff for BS32359.complete
Subject Subject Range Query Range Percent Splice Strand
CG15482-RA 34..961 17..944 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:53 Download gff for BS32359.complete
Subject Subject Range Query Range Percent Splice Strand
CG15482-RA 34..961 17..944 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:22 Download gff for BS32359.complete
Subject Subject Range Query Range Percent Splice Strand
CG15482-RA 34..961 17..944 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:22 Download gff for BS32359.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13210854..13211781 17..944 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:53 Download gff for BS32359.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13210854..13211781 17..944 100   Minus

BS32359.pep Sequence

Translation from 16 to 945

> BS32359.pep
MTAPFTSRTNQAADSGKDQSPIHGLSRNRKRQERRKQRLQEMQDLLYTKH
FSNYRLPASVAAPAPEDQLLLKLQNFESLTEQPSSSRKSTATTSSDSPWS
RLRLVACPCHGCLCSVDPSALLGHYLSDHLPGMGVPFYELEMGKRVSLTC
HISSLERDVNTLLGVYGYRRTGLNPLKCHRNTHLPVEYRRFSQHSALMIF
ACRTMHSVLWERKRVKHEVLAIWVATPLHGVAITLRLLVQPANLPRYYTR
QIKARPMLPLSSNQSCSEFIKTDSNVILISLNDLRPLMDLDVWQQSLTVE
LKVISEASI*

BS32359.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG15482-PA 309 CG15482-PA 1..309 1..309 1612 100 Plus