BS32360.complete Sequence
1049 bp assembled on 2013-05-22
> BS32360.complete
GAAGTTATCAGTCGACATGCCATACGTCCAAGCTCCGGAGGCGCGGCCAG
TGCCCGATGAGCGCTATCCGGGCAGCCAGCAGGATAGGAAGGATATCGCC
ACCCAGACCGTGCGGAGCAGCAAGCCCAAAGACCTGCGACCGCCTTCGCC
GCCGACGCCGTCCCAGACCCTAAACTCCTCTTCCCTTCCGCCCCCAATGT
CCGACCAGGATGCTGATCCCTCCCTGGATGTGCCCACCGGCGTGGCGATG
CCCTACAACATCGACTGGATATTCCCTAGGCTGAGAAACCCCTCGAAGTT
CTGGTACGTGGTCAGCCAGTTCGTCGTCTCCGCCGTTGGAATCTTCAGCA
AAGTTGTGCTGATGTTTTTGAATAAACCCCGCGTCTATAACAGGGAGCGA
CTGATCCAGCTGATAACGAAGCGACCCAAGGGCATTCCCCTGGTCACCGT
GTCCAACCACTACTCCTGCTTCGACGATCCTGGGCTGTGGGGCTGCCTTC
CCCTGGGAATTGTCTGCAATACCTATAAAATTCGTTGGTCAATGGCCGCT
CACGACATTTGCTTCACTAACAAGCTGCACTCGCTCTTCTTCATGTTTGG
CAAGTGCATACCTGTTGTGCGTGGCATCGGTGTCTACCAGGATGCCATCA
ACCTGTGCATCGAGAAGGCCGCACTGGGCCATTGGATCCATGTGTTTCCC
GAAGGCAAGGTGAACATGGATAAGGAGGAGCTGCGTCTCAAGTGGGGCGT
GGGTAGGATCATCTACGAGTCGCCGAAGATCCCCATCATTCTGCCCATGT
GGCACGAGGGCATGGACGATCTGTTGCCCAATGTGGAGCCCTATGTGATA
CAGCGTGGTAAGCAGGTGACGCTGAATGTTGGCCAGCCATTGGACCTCAA
CGACTTTATTCTGGACCTAAAAAAACGACAAGTACCGGAGCCAACGGCGC
GGAAGCTCATTACAGACAAAATCCAGGAAGCCTTTCGGGACTTGCGGGCG
GAGACAGAGAAATTGCACAGAGAGCGCAACTAGAAGCTTTCTAGACCAT
BS32360.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:42:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taz-RC | 1017 | CG8766-PC | 1..1017 | 17..1033 | 4995 | 99.4 | Plus |
| Taz-RA | 1137 | CG8766-PA | 123..1137 | 19..1033 | 4985 | 99.4 | Plus |
| Taz-RD | 837 | CG8766-PD | 1..837 | 197..1033 | 4110 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:42:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taz-RC | 1174 | CG8766-RC | 67..1086 | 16..1035 | 5010 | 99.4 | Plus |
| Taz-RA | 1776 | CG8766-RA | 479..1495 | 19..1035 | 4995 | 99.4 | Plus |
| Taz-RD | 1323 | CG8766-RD | 103..1118 | 20..1035 | 4990 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:42:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12753427..12753817 | 989..599 | 1895 | 99 | Minus |
| 2R | 25286936 | 2R | 12754408..12754751 | 362..19 | 1690 | 99.4 | Minus |
| 2R | 25286936 | 2R | 12753890..12754127 | 600..363 | 1190 | 100 | Minus |
| 2R | 25286936 | 2R | 12753307..12753354 | 1035..988 | 240 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:42:38 has no hits.
BS32360.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:57 Download gff for
BS32360.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taz-RC | 68..1084 | 17..1033 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:51 Download gff for
BS32360.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taz-RC | 68..1084 | 17..1033 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:20 Download gff for
BS32360.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taz-RC | 68..1084 | 17..1033 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:20 Download gff for
BS32360.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12753428..12753816 | 600..988 | 98 | <- | Minus |
| 2R | 12753309..12753353 | 989..1033 | 100 | <- | Minus |
| 2R | 12753891..12754127 | 363..599 | 100 | <- | Minus |
| 2R | 12754408..12754752 | 17..362 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:51 Download gff for
BS32360.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8640814..8640858 | 989..1033 | 100 | <- | Minus |
| arm_2R | 8640933..8641321 | 600..988 | 98 | <- | Minus |
| arm_2R | 8641396..8641632 | 363..599 | 100 | <- | Minus |
| arm_2R | 8641913..8642257 | 17..362 | 99 | | Minus |
BS32360.pep Sequence
Translation from 16 to 1032
> BS32360.pep
MPYVQAPEARPVPDERYPGSQQDRKDIATQTVRSSKPKDLRPPSPPTPSQ
TLNSSSLPPPMSDQDADPSLDVPTGVAMPYNIDWIFPRLRNPSKFWYVVS
QFVVSAVGIFSKVVLMFLNKPRVYNRERLIQLITKRPKGIPLVTVSNHYS
CFDDPGLWGCLPLGIVCNTYKIRWSMAAHDICFTNKLHSLFFMFGKCIPV
VRGIGVYQDAINLCIEKAALGHWIHVFPEGKVNMDKEELRLKWGVGRIIY
ESPKIPIILPMWHEGMDDLLPNVEPYVIQRGKQVTLNVGQPLDLNDFILD
LKKRQVPEPTARKLITDKIQEAFRDLRAETEKLHRERN*
BS32360.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taz-PC | 338 | CG8766-PC | 1..338 | 1..338 | 1816 | 100 | Plus |
| Taz-PA | 378 | CG8766-PA | 42..378 | 2..338 | 1811 | 100 | Plus |
| Taz-PD | 278 | CG8766-PD | 1..278 | 61..338 | 1496 | 100 | Plus |
| Taz-PB | 278 | CG8766-PB | 1..278 | 61..338 | 1496 | 100 | Plus |
