BS32361.complete Sequence
929 bp assembled on 2013-05-22
> BS32361.complete
GAAGTTATCAGTCGACATGCCGAAAAACGGAGGTGCTGGTCACAGGAACA
CTGCTCCCAGGAAGCGCCAAATACCGGCTGCCCAGCTGGATGAAGACAGT
CCCATTGTCCAACAATTTCGAATTTATTCTAATGAATTGATCATGAAACA
CGATCGCCACGAGCGAATTGTCAAGCTGAGCCGTGACATTACCATCGAGT
CCAAGCGTATCATCTTCCTGCTGCACTCCATTGACTCGCGTAAGCAGAAT
AAGGAGAAGGTCCTGGAGGAGGCACGTCAGCGACTGAACAAGCTGATCGC
GGTTAACTTTAGGGCTGTGGCCCTGGAACTGCGCGACCAGGATGTCTACC
AGTTCCGCAGCTCCTACTCTCCAGGATTGCAGGAGTTTATCGAGGCCTAC
ACCTACATGGAGTACCTGTGCCACGAGGATGCTGAGGGCGAGAACGAAAC
CAAGAGCGTTTCAGATTGGCAGGCCATTCAGGCGGTGATGCAGTACGTCG
AGGAGAGCAGCCAGCCAAAGGAAGAACCAACTGAAGGCGAAGATGTTCAG
GCTATAGCTCAGGTTGAGAGCCCAAAGAAGTTCCAGTTTTTCGTAGACCC
CACGGAATATATACTTGGACTTTCGGATCTTACTGGTGAACTGATGCGCC
GCTGCATAAATTCGCTAGGCAGTGGAGATACAGACACCTGTTTGGACACC
TGCAAGGCCCTGCAGCATTTCTACAGCGGTTACATCAGTCTAAACTGTCA
GAGAGCCCGTGAACTATGGCGTAAGATCACTACCATGAAGCAGAGCGTTC
TTAAGGCCGAGAATGTTTGCTACAATGTAAAAGTTCGCGGCGGAGAGGCT
GCAAAATGGGGCGCCACTTTTGATCAAAAGCCAGCCGATGAAGTTGACGA
GGGCTTCTACTAAAAGCTTTCTAGACCAT
BS32361.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:41:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Trax-RB | 897 | CG5063-PB | 1..897 | 17..913 | 4485 | 100 | Plus |
Trax-RA | 777 | CG5063-PA | 1..713 | 17..729 | 3565 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:41:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Trax-RB | 1077 | CG5063-RB | 134..1030 | 17..913 | 4485 | 100 | Plus |
Trax-RA | 1127 | CG5063-RA | 134..846 | 17..729 | 3565 | 100 | Plus |
Trax-RA | 1127 | CG5063-RA | 896..1080 | 729..913 | 925 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:41:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15361825..15362537 | 17..729 | 3565 | 100 | Plus |
3R | 32079331 | 3R | 15362587..15362771 | 729..913 | 925 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:41:50 has no hits.
BS32361.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:40 Download gff for
BS32361.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trax-RB | 102..996 | 17..911 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:29 Download gff for
BS32361.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trax-RB | 134..1028 | 17..911 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:05 Download gff for
BS32361.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trax-RB | 134..1028 | 17..911 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:05 Download gff for
BS32361.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15361825..15362537 | 17..729 | 100 | -> | Plus |
3R | 15362588..15362769 | 730..911 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:29 Download gff for
BS32361.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11187547..11188259 | 17..729 | 100 | -> | Plus |
arm_3R | 11188310..11188491 | 730..911 | 100 | | Plus |
BS32361.pep Sequence
Translation from 16 to 912
> BS32361.pep
MPKNGGAGHRNTAPRKRQIPAAQLDEDSPIVQQFRIYSNELIMKHDRHER
IVKLSRDITIESKRIIFLLHSIDSRKQNKEKVLEEARQRLNKLIAVNFRA
VALELRDQDVYQFRSSYSPGLQEFIEAYTYMEYLCHEDAEGENETKSVSD
WQAIQAVMQYVEESSQPKEEPTEGEDVQAIAQVESPKKFQFFVDPTEYIL
GLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSGYISLNCQRAREL
WRKITTMKQSVLKAENVCYNVKVRGGEAAKWGATFDQKPADEVDEGFY*
BS32361.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Trax-PB | 298 | CG5063-PB | 1..298 | 1..298 | 1551 | 100 | Plus |
Trax-PA | 258 | CG5063-PA | 1..241 | 1..241 | 1235 | 99.2 | Plus |