Clone BS32361 Report

Search the DGRC for BS32361

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:323
Well:61
Vector:pDNR-Dual
Associated Gene/TranscriptTrax-RB
Protein status:BS32361.pep: full length peptide match
Sequenced Size:929

Clone Sequence Records

BS32361.complete Sequence

929 bp assembled on 2013-05-22

> BS32361.complete
GAAGTTATCAGTCGACATGCCGAAAAACGGAGGTGCTGGTCACAGGAACA
CTGCTCCCAGGAAGCGCCAAATACCGGCTGCCCAGCTGGATGAAGACAGT
CCCATTGTCCAACAATTTCGAATTTATTCTAATGAATTGATCATGAAACA
CGATCGCCACGAGCGAATTGTCAAGCTGAGCCGTGACATTACCATCGAGT
CCAAGCGTATCATCTTCCTGCTGCACTCCATTGACTCGCGTAAGCAGAAT
AAGGAGAAGGTCCTGGAGGAGGCACGTCAGCGACTGAACAAGCTGATCGC
GGTTAACTTTAGGGCTGTGGCCCTGGAACTGCGCGACCAGGATGTCTACC
AGTTCCGCAGCTCCTACTCTCCAGGATTGCAGGAGTTTATCGAGGCCTAC
ACCTACATGGAGTACCTGTGCCACGAGGATGCTGAGGGCGAGAACGAAAC
CAAGAGCGTTTCAGATTGGCAGGCCATTCAGGCGGTGATGCAGTACGTCG
AGGAGAGCAGCCAGCCAAAGGAAGAACCAACTGAAGGCGAAGATGTTCAG
GCTATAGCTCAGGTTGAGAGCCCAAAGAAGTTCCAGTTTTTCGTAGACCC
CACGGAATATATACTTGGACTTTCGGATCTTACTGGTGAACTGATGCGCC
GCTGCATAAATTCGCTAGGCAGTGGAGATACAGACACCTGTTTGGACACC
TGCAAGGCCCTGCAGCATTTCTACAGCGGTTACATCAGTCTAAACTGTCA
GAGAGCCCGTGAACTATGGCGTAAGATCACTACCATGAAGCAGAGCGTTC
TTAAGGCCGAGAATGTTTGCTACAATGTAAAAGTTCGCGGCGGAGAGGCT
GCAAAATGGGGCGCCACTTTTGATCAAAAGCCAGCCGATGAAGTTGACGA
GGGCTTCTACTAAAAGCTTTCTAGACCAT

BS32361.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:41:51
Subject Length Description Subject Range Query Range Score Percent Strand
Trax-RB 897 CG5063-PB 1..897 17..913 4485 100 Plus
Trax-RA 777 CG5063-PA 1..713 17..729 3565 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:41:52
Subject Length Description Subject Range Query Range Score Percent Strand
Trax-RB 1077 CG5063-RB 134..1030 17..913 4485 100 Plus
Trax-RA 1127 CG5063-RA 134..846 17..729 3565 100 Plus
Trax-RA 1127 CG5063-RA 896..1080 729..913 925 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:41:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15361825..15362537 17..729 3565 100 Plus
3R 32079331 3R 15362587..15362771 729..913 925 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:41:50 has no hits.

BS32361.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:40 Download gff for BS32361.complete
Subject Subject Range Query Range Percent Splice Strand
Trax-RB 102..996 17..911 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:29 Download gff for BS32361.complete
Subject Subject Range Query Range Percent Splice Strand
Trax-RB 134..1028 17..911 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:05 Download gff for BS32361.complete
Subject Subject Range Query Range Percent Splice Strand
Trax-RB 134..1028 17..911 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:05 Download gff for BS32361.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15361825..15362537 17..729 100 -> Plus
3R 15362588..15362769 730..911 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:29 Download gff for BS32361.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11187547..11188259 17..729 100 -> Plus
arm_3R 11188310..11188491 730..911 100   Plus

BS32361.pep Sequence

Translation from 16 to 912

> BS32361.pep
MPKNGGAGHRNTAPRKRQIPAAQLDEDSPIVQQFRIYSNELIMKHDRHER
IVKLSRDITIESKRIIFLLHSIDSRKQNKEKVLEEARQRLNKLIAVNFRA
VALELRDQDVYQFRSSYSPGLQEFIEAYTYMEYLCHEDAEGENETKSVSD
WQAIQAVMQYVEESSQPKEEPTEGEDVQAIAQVESPKKFQFFVDPTEYIL
GLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSGYISLNCQRAREL
WRKITTMKQSVLKAENVCYNVKVRGGEAAKWGATFDQKPADEVDEGFY*

BS32361.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:56
Subject Length Description Subject Range Query Range Score Percent Strand
Trax-PB 298 CG5063-PB 1..298 1..298 1551 100 Plus
Trax-PA 258 CG5063-PA 1..241 1..241 1235 99.2 Plus