BS32372.complete Sequence
1004 bp assembled on 2013-05-22
> BS32372.complete
GAAGTTATCAGTCGACATGGAGTTTCTGGACCCAAAGATCCACAGCGCCG
ACAAGTTGTGCGACCAATTCGAAGAGTATAAAAAGAAGCGTGAGGAAGCG
CACTTGGAGCTGAAGAACAAGGTGAACACCATGTTCAATTTGAAAGCGGA
TATCAAGGAGCTCAACGAAAATATGGAAACACTTCGCATTGGAATGCAAC
AGCTGGATGACCAGCAGAAGGTTCAGCTGCATCAGGGAAAGCTAATGTCT
CAGTCGATGTTCGGTACCATTGAGGCTGCTCCTCCAGATGAAGGACAAGT
CCCTTTGAAGGACGAAGATACCATACCCAACAAGCTCTTGATAAAGTCCG
AGGTAAAAAAATGTCTCTTTGAGGGCTGCCAAAGGCGAATAGACAGCCAG
TTGCTTTTGCTGCACTACCTATGTGATCATGAGAACAAGGAAGCTTCCTT
TCAGCGCTTTCTTCCCGTAGTGAAACATGAACGGGCTGTGCTTTCTTTTA
AGCCGACGAGCTGTAAGAATCCTGATAATCAGGTGTTGGGACTCCTGGCT
TACAATGCACAACAGTTATTGATATCCCAGCGGCAATGTGAGCCCTATAA
CAGCTTCCCGCTGAACCAACACTCGCACCTGGATAGTCACATCCCGTTGG
TGGTGCTAATTTCCCAGACATTGCCCAATACGGCTCTGCGGAATAGGCGT
TCACCAGATAGCCACAGAAACAGTGAGTTCGTCCTCTGGCTGGTTACACC
CAGCGACGGACTGCAGTTGAACGTTACGCTCAGTCTCTATGGAAGAGATG
TTGCACTAAGAACCAGCTGTGTTTTAGGTGTTCGAAAGGTTAATAATAAC
CGGGACGCGGACTATTACATGGCAGTCGACGAAAGTTACTGGCGTCTGAC
GTACGCCGAAGTGGAGAAACTCTCAAACAACTTTCGTGACGAACTCCACC
TGGAGGTTGTAGTTACTGAGTCCGAGGGAAACGTGTAAAAGCTTTCTAGA
CCAT
BS32372.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:41:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12923-RB | 972 | CG12923-PB | 1..972 | 17..988 | 4860 | 100 | Plus |
| CG12923-RA | 972 | CG12923-PA | 1..972 | 17..988 | 4860 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:41:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12923-RB | 1838 | CG12923-RB | 103..1074 | 17..988 | 4860 | 100 | Plus |
| CG12923-RA | 1234 | CG12923-RA | 103..1074 | 17..988 | 4860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:41:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9887750..9888721 | 17..988 | 4860 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:41:54 has no hits.
BS32372.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 10:00:42 Download gff for
BS32372.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12923-RA | 103..1072 | 17..986 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:12:32 Download gff for
BS32372.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12923-RA | 103..1072 | 17..986 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:06 Download gff for
BS32372.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12923-RA | 103..1072 | 17..986 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:06 Download gff for
BS32372.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9887750..9888719 | 17..986 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:12:32 Download gff for
BS32372.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5775255..5776224 | 17..986 | 100 | | Plus |
BS32372.pep Sequence
Translation from 16 to 987
> BS32372.pep
MEFLDPKIHSADKLCDQFEEYKKKREEAHLELKNKVNTMFNLKADIKELN
ENMETLRIGMQQLDDQQKVQLHQGKLMSQSMFGTIEAAPPDEGQVPLKDE
DTIPNKLLIKSEVKKCLFEGCQRRIDSQLLLLHYLCDHENKEASFQRFLP
VVKHERAVLSFKPTSCKNPDNQVLGLLAYNAQQLLISQRQCEPYNSFPLN
QHSHLDSHIPLVVLISQTLPNTALRNRRSPDSHRNSEFVLWLVTPSDGLQ
LNVTLSLYGRDVALRTSCVLGVRKVNNNRDADYYMAVDESYWRLTYAEVE
KLSNNFRDELHLEVVVTESEGNV*
BS32372.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12923-PB | 323 | CG12923-PB | 1..323 | 1..323 | 1684 | 100 | Plus |
| CG12923-PA | 323 | CG12923-PA | 1..323 | 1..323 | 1684 | 100 | Plus |
| CG11227-PA | 753 | CG11227-PA | 473..748 | 47..318 | 157 | 20.9 | Plus |
| CG11227-PB | 764 | CG11227-PB | 484..759 | 47..318 | 157 | 20.9 | Plus |
