BS32374.complete Sequence
2252 bp assembled on 2013-09-16
> BS32374.complete
GAAGTTATCAGTCGACATGCATCGATGGTTCTTTGCCAACGAGCGGGAGG
AGTGTGAGCGAAAACCGGAGGAAGACGGTCCTAGTAGCGCTTCGGAGACA
CAAGAGCCACCACCTCCACCACCAGTTCCGACTACTGAGTGGCCCTTCTG
TGTAGTCTTTCACAGTTCACTAAACGGTAATGAGTATGTTGCCATTAGTG
GCAACTGTCCCTCTCTTGGAAACTGGGATCCCAAGGAGGTGTACATTTTG
GCCAAGAATGACTGCATTAGCTGCCTATGCAATTGCCGTCAGTTTGAGGC
AAGCTTAGAGATACCGCGTAACATCGACATCCACTATCGGTACTGCGTCG
TGATCCACGATCCCGAGACGGATGAGGTGTATATACGCTTCTGGGAGTCC
CAATTATATCCCAGAGTGATTCGAACTTGTCAGAACATGCTGAAGAACTG
CGACGTCTTTGGAAAACCACACGACGATGATGAAGCGAACCAGGTGGATC
GCGGCTGGGCCACCACAGAGACAATTGTGCACCTGAAGATCTTCAATGCT
CCATTCTGTTGGCAACGTCAGAAACCGAGGCTCCTGTATGTCCATGTGCA
GCCCATGTTTGAGGTGCCGGAGAATCCTTGTAACGAACCAGCCAATCCCA
TCAAAATGGTTTCGTCGCAAACACGTTTATCGCGTTATCTGAGCACCCGG
GAAATTAAGGCAGGGAACCAGTATCTTCAATTGGCACAAGTCGAGGTGAC
CAATCTATGTGTCCAAAATGCTTTGGCCGCGCAGCAACGATTTGGAGCCA
GATGTGGGCCGAAGGATATGGAGCTATTTCATTGTTCCATCGCTTTTCCG
GAGGAAACGCTCTACCGACTGGATTTGTACACATACGCGCATAAAGCAGG
CTATGATGAACCACCGTATCATTACGGGTACGGATTCCTGATGCCAGATC
AGCTGCTGGGCACCGAAGGCTCTGCCCGGGTGAAGATCACTTGCGCCTCC
ACCCACCGTCCACTAATGGAGATGTGTGTACGCTATCTAATAATTCGACC
TTTGCCAAATTTCCGTTGCGATTTGAGCCACAGCTACGAGCGTTACTGGC
GCAAAAATCGCCTATGCATGAACATCGGGCACAAAGGATCGGGAAATACG
TACCGGTTAGGATCCGATGTGGTAAGGGAGAATACCTTGTATGGTTTCAA
GCAGGCTGTTTTGGCCAATGCAGACATGGTGGAGATGGATGTCCAGCTCA
CGCAGGATGCCCAGGTGGTGGTGTATCACGATTTTGTACTGCGATTTATG
TTGCAGAGAATGCCTAGTTTTGAGGATCTTCTGGAGAATCAGGATCTGCT
GATATTTGCCTACGAAAATCTTAACAAACTAATGCTCCTCGCTATGGGAG
GATCAAAACGAAAAGACCTCATTGCCGTTCCCCTGGAGGCATTTTCCTAC
GATCAACTGAAGGAGGTGAAGGTCCTGCGATTCGCTGGCAGCAAAGGCTG
CGATAAGTCCTGTGATCGAATGCTGCTGGAGCAGCGCCCCTTTCCCCTGC
TCCTCGACCTCCTGGATGAGGAAAATCTACCCGTCGACATGGGCTTCCTA
ATCGAGATCAAGTGGCCGCAGATGACCAATATGCGGCGTTGGGAGAGCGG
CAGCTTTAAGCCCACGTTCGATCGAAACTTCTATGTGGACACCATATTGG
AGATTGTTTTAAATAAGGCTGGAAAGAGGCGCATAGTCTTTTGCAGCTTC
GATGCCGACATCTGTGCCATGGTTCGGTTTAAGCAGAATGTATATCCCGT
GACTTTACTACTGGAGGATCCGCACTCGCCGGTTCAGTATGCAGACCAAA
GGGTAAGCGTGCAGGATGTTGCCGTGAGGTTTTGCAACAGTCTGGAGTTC
CTTGGGCTGACCCTTCATGCTAACTCACTGCTGAACAAGCCCTCGACTAT
GGCATACCTGCACCAGATCAATCTGGACGCTTTTGTTTATGGTAGTTCCA
CCATTGACCTGGAGATCCGCAATAAGCTAAAGAAGCACGGAGTGCTGGGA
ATAATCTACGATCGTCTCGACCAACTGGACCAAGTGGGCGAAGAGCTGGA
GGGGGACACCATGTGCACCATTGATTCAGTGACCACAAGGCGCGTGATCC
AGGAGACGGAGGTGGAGGAGTGGATCCAGAAGTGTGGCTACAAGCCGGAA
ACTTCCATCGTCGTACATAACATTTACATCGACTGAAAGCTTTCTAGACC
AT
BS32374.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:47:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3942-RA | 2220 | CG3942-PA | 1..2220 | 17..2236 | 11100 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:47:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3942-RA | 2406 | CG3942-RA | 120..2340 | 16..2236 | 11105 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:47:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12254306..12256526 | 16..2236 | 11105 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:47:51 has no hits.
BS32374.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:49:28 Download gff for
BS32374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3942-RA | 121..2339 | 17..2235 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:18 Download gff for
BS32374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3942-RA | 121..2339 | 17..2235 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:18 Download gff for
BS32374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12254307..12256525 | 17..2235 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:49:28 Download gff for
BS32374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8080029..8082247 | 17..2235 | 100 | | Plus |
BS32374.pep Sequence
Translation from 16 to 2235
> BS32374.pep
MHRWFFANEREECERKPEEDGPSSASETQEPPPPPPVPTTEWPFCVVFHS
SLNGNEYVAISGNCPSLGNWDPKEVYILAKNDCISCLCNCRQFEASLEIP
RNIDIHYRYCVVIHDPETDEVYIRFWESQLYPRVIRTCQNMLKNCDVFGK
PHDDDEANQVDRGWATTETIVHLKIFNAPFCWQRQKPRLLYVHVQPMFEV
PENPCNEPANPIKMVSSQTRLSRYLSTREIKAGNQYLQLAQVEVTNLCVQ
NALAAQQRFGARCGPKDMELFHCSIAFPEETLYRLDLYTYAHKAGYDEPP
YHYGYGFLMPDQLLGTEGSARVKITCASTHRPLMEMCVRYLIIRPLPNFR
CDLSHSYERYWRKNRLCMNIGHKGSGNTYRLGSDVVRENTLYGFKQAVLA
NADMVEMDVQLTQDAQVVVYHDFVLRFMLQRMPSFEDLLENQDLLIFAYE
NLNKLMLLAMGGSKRKDLIAVPLEAFSYDQLKEVKVLRFAGSKGCDKSCD
RMLLEQRPFPLLLDLLDEENLPVDMGFLIEIKWPQMTNMRRWESGSFKPT
FDRNFYVDTILEIVLNKAGKRRIVFCSFDADICAMVRFKQNVYPVTLLLE
DPHSPVQYADQRVSVQDVAVRFCNSLEFLGLTLHANSLLNKPSTMAYLHQ
INLDAFVYGSSTIDLEIRNKLKKHGVLGIIYDRLDQLDQVGEELEGDTMC
TIDSVTTRRVIQETEVEEWIQKCGYKPETSIVVHNIYID*
BS32374.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:41:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3942-PA | 739 | CG3942-PA | 1..739 | 1..739 | 3976 | 100 | Plus |
CG2818-PA | 707 | CG2818-PA | 1..662 | 1..687 | 974 | 35.6 | Plus |
CG2818-PB | 521 | CG2818-PB | 2..476 | 186..687 | 714 | 35.8 | Plus |
CG9394-PB | 679 | CG9394-PB | 70..631 | 56..685 | 528 | 27.2 | Plus |
CG9394-PA | 679 | CG9394-PA | 70..631 | 56..685 | 528 | 27.2 | Plus |