Clone BS32376 Report

Search the DGRC for BS32376

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:323
Well:76
Vector:pDNR-Dual
Associated Gene/TranscriptCG14053-RA
Protein status:BS32376.pep: gold
Sequenced Size:725

Clone Sequence Records

BS32376.complete Sequence

725 bp assembled on 2013-05-24

> BS32376.complete
GAAGTTATCAGTCGACATGGACATCTCCCAATCGGACGACCTATACGAAT
GCGGAGTGGAGAGGGAAAGGGAGACTGTCCATCAGTCATCGCGCACCGTG
AGAGATCCCCTTCAGGTGTTCCATTGGATAGCGTCTTTGGATGTGGCCCA
GCTGGAGGACGAGACACCGCCCCCCAGTTTCTACTTCGATTTGCTGGAGA
CAAATGACGTCGAACTGGACTGCAGTGTTTACAGCGGAAAGCTTCTTGTA
ACGCTCGGTAGTCAGACAGATGTGTCGCAGCCAGAAGTTTCGCAGGAGTA
TGCAGACAACGCACTGGCGGTGGAACCAACAGATCTGAAAATATCAATAC
CTGAAGATGCGACAGCCTGCCCATGTCATGCCGCATCTGATGATGAAGTA
TCAATTACAATATTTGTAGAAAGCGAAACTGAACCGGAACCACGTGGGAA
CTCCGAGCATCAACCAAGTCGCTTTTCGTTTTTTGGCATGTTGCTAAAGG
CGGTCGTGGCACTGTCCGTGGTGAACGCCCTTTATGTTCTGTGGACGATC
GGCTTTGAGGCCTTCAAGAACCGCGTATGGCAGTCATCTTCTGTGAATAT
GCCACCGCCTCGGACTACATCGATCAGGGAGACGCGTGCTTCGCTGCCCG
AGAGCATTTGGCGAAGTGTTGAAGCTAAATTGGCTAGCCTGCGAGCCCGC
TTGAACTAAAAGCTTTCTAGACCAT

BS32376.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:44:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG14053-RB 693 CG14053-PB 1..693 17..709 3450 99.9 Plus
CG14053-RA 693 CG14053-PA 1..693 17..709 3450 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:44:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG14053-RB 1766 CG14053-RB 435..1127 17..709 3450 99.9 Plus
CG14053-RA 1109 CG14053-RA 90..782 17..709 3450 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:44:17
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2192278..2192970 709..17 3450 99.9 Minus
Blast to na_te.dros performed on 2014-11-28 13:44:18 has no hits.

BS32376.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-24 12:17:13 Download gff for BS32376.complete
Subject Subject Range Query Range Percent Splice Strand
CG14053-RA 90..780 17..707 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:13:35 Download gff for BS32376.complete
Subject Subject Range Query Range Percent Splice Strand
CG14053-RA 90..780 17..707 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:56 Download gff for BS32376.complete
Subject Subject Range Query Range Percent Splice Strand
CG14053-RA 90..780 17..707 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:56 Download gff for BS32376.complete
Subject Subject Range Query Range Percent Splice Strand
X 2192280..2192970 17..707 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:13:35 Download gff for BS32376.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2086313..2087003 17..707 99   Minus

BS32376.pep Sequence

Translation from 16 to 708

> BS32376.pep
MDISQSDDLYECGVERERETVHQSSRTVRDPLQVFHWIASLDVAQLEDET
PPPSFYFDLLETNDVELDCSVYSGKLLVTLGSQTDVSQPEVSQEYADNAL
AVEPTDLKISIPEDATACPCHAASDDEVSITIFVESETEPEPRGNSEHQP
SRFSFFGMLLKAVVALSVVNALYVLWTIGFEAFKNRVWQSSSVNMPPPRT
TSIRETRASLPESIWRSVEAKLASLRARLN*

BS32376.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG14053-PB 230 CG14053-PB 1..230 1..230 1184 100 Plus
CG14053-PA 230 CG14053-PA 1..230 1..230 1184 100 Plus