BS32377.complete Sequence
941 bp assembled on 2013-05-24
> BS32377.complete
GAAGTTATCAGTCGACATGGCCGACGGCTTTAAGAAGTACTTCAATGGGA
CAACCATCAATGGACGCGCTAACGTGGCAAAGGCCACATACGCCACGTTG
GCCCTGTTGTTCATCGTGTACAAGCTGCGCCGCGGATCCGGCAAGACCGG
CGAGTTGGCCAGCGGCAAGTGCAGCTGCGAATCGGACCACGAGTCGTCCC
TCAATGGCGACATTGGCGTCTACGGCGCGGATCCCGACTGCTCCGTTTGC
CGGGAGCGATCGGAGCGGGCCATGACCGAGTTCGATCGCGAGCAGCAGCG
CCGGGCGGCGGGCGAGGATGACAATGGTTGTCGCGACGATCCGCCGCCGC
CACCACCTCCGCCCACATCGGGAGGATCAGGCTCTGCTCCGCGGCGCAAG
TGTCCCTGCGAGGAGCCGCAGCGTCGGGCGGAGGGAGCCGTGAAGCATAG
CAGCCACAGCAGCTGGGCGCGAGGCCAGCAGATTCAGCCGCCAAACCAGT
ACCAACAGTATAAACAGCCCGAGGCGGAGCAAGTGCGTCCGGCTAGCCAA
GTGATGGGTCAGGTGCACGACGCCTTCTACAGGGTGCTGCGAGGAGTCGT
GGGAGCCGTTTTGGGCAATGCGGCGGTCAACACCAGCGGCACCGCTTCCG
ATTCCCCAGCTCAGGCAGCCGCAGTGGAAGTCTCGCGGGATGAGCTGGAC
GAGGATGAACGTGACGACGGCCAGGACGATGAGACGCCGTTAAAGCGCCG
CACGGCACCGCGCTCTTGCGTGCCCACAGGCAGCCAAGAGAACGCCTCGG
GACAGCCGGAGGAACTGGGCCGGGAACAGGCCGACGACCAGCCGCAGGCG
GAGGAGCAGGCGGAGTACAGCGCGTTCAGCGATGGCTTCACTTCCGGCCT
GTCCTTTACCAGCGATGAAAAGTAGAAGCTTTCTAGACCAT
BS32377.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:44:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15459-RA | 909 | CG15459-PA | 1..909 | 17..925 | 4545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:44:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15459-RA | 1072 | CG15459-RA | 85..993 | 17..925 | 4545 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:44:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20412420..20413271 | 925..74 | 4260 | 100 | Minus |
| X | 23542271 | X | 20413439..20413497 | 75..17 | 295 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 13:44:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6813..6884 | 449..518 | 139 | 68.1 | Plus |
BS32377.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-24 12:17:15 Download gff for
BS32377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15459-RA | 112..1020 | 17..925 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:13:37 Download gff for
BS32377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15459-RA | 85..993 | 17..925 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:59 Download gff for
BS32377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15459-RA | 85..993 | 17..925 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:59 Download gff for
BS32377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20412420..20413271 | 74..925 | 100 | <- | Minus |
| X | 20413441..20413497 | 17..73 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:13:37 Download gff for
BS32377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20283447..20284298 | 74..925 | 100 | <- | Minus |
| arm_X | 20284468..20284524 | 17..73 | 100 | | Minus |
BS32377.pep Sequence
Translation from 16 to 924
> BS32377.pep
MADGFKKYFNGTTINGRANVAKATYATLALLFIVYKLRRGSGKTGELASG
KCSCESDHESSLNGDIGVYGADPDCSVCRERSERAMTEFDREQQRRAAGE
DDNGCRDDPPPPPPPPTSGGSGSAPRRKCPCEEPQRRAEGAVKHSSHSSW
ARGQQIQPPNQYQQYKQPEAEQVRPASQVMGQVHDAFYRVLRGVVGAVLG
NAAVNTSGTASDSPAQAAAVEVSRDELDEDERDDGQDDETPLKRRTAPRS
CVPTGSQENASGQPEELGREQADDQPQAEEQAEYSAFSDGFTSGLSFTSD
EK*
BS32377.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15459-PA | 302 | CG15459-PA | 1..302 | 1..302 | 1596 | 100 | Plus |
