BS32381.complete Sequence
1220 bp assembled on 2013-05-24
> BS32381.complete
GAAGTTATCAGTCGACATGTCTATCAGACTGAACGATGACGCGATGCGGC
AGTTCCGGGTGGCCAAGGTGTTCCCGGAGACAAAGCACCACACGCTTGCA
ATGGAGTTCTCCTCGGACGGACTGCGCCTGCTGGTCTGCGACCACTCCGC
CCTCTCGATCTTCAGCAGCACTCGACAGGTGCAGGTCTGCAAGGTGCCTA
TGCACCACTACCTGCCCGACGTGGCCTGCTTCGTCCAGCAGGACACTCGC
GTCCTGCACTCCACCTCAAAGCATGACTACACCATCCGATGCCTGGACCT
TAATACCCGCCACTGCGTTCGAGTTTTCGGTGGCCATGCAAAGACTATCA
ATAGGCTGGCCTCCCAGCCTGGAGGCGAGAATGTGTTCATCAGTGCCGGG
CGGGATGATCAGGTTTACATGTGGGACATTCGGGTCAAAACTCACACACA
CCGCATAAAGAATCTGCGACGGCCACTGTGCGCTTTTGATCCTGAGGGCT
TGTTCCTGGCCACCAGTTCGGGCACGGAGGGCATCCAGATCCGCGATGTG
AGGATGATGGGCGGTGAGCCGAGCCGAAAGTTCGTATACCAGGTGAACGC
CAAGGCCAATTGGACACAGTTGCAGTTCGCTCCCAACGGGAAGAGCCTGC
TGCTGAGCACGGATCACTCCTGGTGCTTCAGTGTCTCGGCCATTGATGGT
ACCTACCAACAGTCCTTTACTGGCTATTCGAATAAGTTAAGGCTGCCGTT
GGATGCCACTTACACGCCGGACTCGCAGTTCATCCTTTCGGGAGCGGATA
AGGGCAGGATTCACATTTGGCGCGCTGCCGATGGATTTCCTGTGGCAGTC
CTTAAGGGCAACAATATGGGTCCTGTTCGATGCATGCGCTTCAATCCGAG
AGCCACCATGTTCGTGAGCAGCGACTCACGAATCGTGTTCTGGATGCCCA
TGGCGAATGGAGTTTACGATTGGGTGAAACGCCTGAAGCCCGGCGAAACT
ATCTCCTTTACGGACGAAACTGTACAGGAGGAGGCTGTCAAGGCTCCTAG
GACGATTCCTATGCCCAAGCCCAAAATTGAAACGGTATGGAAAATAAAGA
GACTGAACAGAAAGAGAGCTTGCACAGGAGATGAAATAGTTGATCTCACC
AATGCCCTACACAATAATGACTCCATGGAAGATGGCGAAATAGCCGAAGA
CTAAAAGCTTTCTAGACCAT
BS32381.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:44:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3515-RA | 1188 | CG3515-PA | 1..1188 | 17..1204 | 5910 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:44:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3515-RA | 1511 | CG3515-RA | 72..1261 | 17..1206 | 5920 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:44:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2551395..2552331 | 1206..270 | 4655 | 99.8 | Minus |
| 2L | 23513712 | 2L | 2552500..2552754 | 271..17 | 1275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:44:39 has no hits.
BS32381.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-24 12:17:20 Download gff for
BS32381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3515-RA | 91..1276 | 17..1202 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:13:46 Download gff for
BS32381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3515-RA | 72..1257 | 17..1202 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:34:08 Download gff for
BS32381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3515-RA | 72..1257 | 17..1202 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:34:08 Download gff for
BS32381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2551399..2552329 | 272..1202 | 99 | <- | Minus |
| 2L | 2552500..2552754 | 17..271 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:13:46 Download gff for
BS32381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2551399..2552329 | 272..1202 | 99 | <- | Minus |
| arm_2L | 2552500..2552754 | 17..271 | 100 | | Minus |
BS32381.pep Sequence
Translation from 16 to 1203
> BS32381.pep
MSIRLNDDAMRQFRVAKVFPETKHHTLAMEFSSDGLRLLVCDHSALSIFS
STRQVQVCKVPMHHYLPDVACFVQQDTRVLHSTSKHDYTIRCLDLNTRHC
VRVFGGHAKTINRLASQPGGENVFISAGRDDQVYMWDIRVKTHTHRIKNL
RRPLCAFDPEGLFLATSSGTEGIQIRDVRMMGGEPSRKFVYQVNAKANWT
QLQFAPNGKSLLLSTDHSWCFSVSAIDGTYQQSFTGYSNKLRLPLDATYT
PDSQFILSGADKGRIHIWRAADGFPVAVLKGNNMGPVRCMRFNPRATMFV
SSDSRIVFWMPMANGVYDWVKRLKPGETISFTDETVQEEAVKAPRTIPMP
KPKIETVWKIKRLNRKRACTGDEIVDLTNALHNNDSMEDGEIAED*
BS32381.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:20:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3515-PA | 395 | CG3515-PA | 1..395 | 1..395 | 2104 | 100 | Plus |
| Wdr82-PA | 317 | CG17293-PA | 1..311 | 1..311 | 532 | 36.2 | Plus |
