BS32389.complete Sequence
1967 bp assembled on 2013-09-16
> BS32389.complete
GAAGTTATCAGTCGACATGAATCCGAAACCAACAACTACCAAGCTGGCCG
AAATTGAGCAGTTTTTGTTGGATGTCCGCGCCCACTTCCGAGCCTCGCTG
GAGACCTCGGAGTACGAGAACACCTCGAACCTATTCCATGTGACGGCCGC
CGAGCAGACCGCCGCTCTTCTGGCCCGCTGCGAGATCCTGCTGGCTGCAG
CCAGTTCTGCATCGGGATCGGGATCGGGACTGGAACTGGGATCAGGGCTG
GGATGCGCAGACGAGCAGGCGGCAGCTAACCATCGTTCCAGCCTGGTCGA
CTGTGTCGATAGCAAGGTGGGCGCGGAGACCGGTCCCAGCGGTTATCTGG
AGATGCTTGCCTCCCCGTCACCCTCGAAAAGCTCACTGTCCGCCTCGCGG
GAGTACATTGATTTAGGCAGCAGCGGATCCCTGGATCGTTGCTCCGTCAA
TCAACCGGTTCCGGCAGCGAAGGACAAGGAGCCACATCAGCAGCTCTACG
AGATTTGCCAGGGCCAGGGAGCGGGCCAGGACGAGGATGAGGCGCAACAG
GCGATCACCTTCACCCACGAGGTGTTCATTGACTGCCCCTATGCAGATCT
GCCCGCTGGCCACTTGTCCCTGCAGAGGTCAACAAAGTACGGACAGCTGC
AGAGGATTGTGCCCAAGCGGCTGTTCTTCGACCAGACCCGCAAGTGCTAC
TGTGGCATCCTCAACGATTGGATGCTGTGCTATGCCGACGGCCCGACCGC
CTGTCGACCCAGCAGCACGCTCTACTTGAAGAGCTCCTCCATCGAGATTG
AACACTTCGGAGAGGGGAAGCGGCGCGACATCTGCTTCCAGATCACAACA
GACGACCCCAACAAGAAGTTCGTGTACCAGGCCAACAACGAAGTCGATGC
CAAAGAGTGGATACACGCCATTGAGGCGGCCATCCGCGGAGATGCTGGTG
CTCATTCAGCGTTAAAGACTCCACCGCCCCGGAAACTGCCCACGCCGCCG
GTCCAAAAGAAATCCACCTACACAGCAGCGGATATCATCTACGAGGAGCC
CTCGCCCGTGTATGGTCTCATAGACTCCTCCTCCATGGTGCTCCCTAAGC
TGCCGGAGAAAAGCAACAGCCCAAGCGCCCTCGCCCGACGTTTCGAGTAC
GATGTGCCCAAATGCCCGGCACAGCCGCTGCAGGACACCTCCTCCAGGGT
GGCATCTGTAAGTGGGGAGCTGGAATCCCTGGGACTACTCAACGAGGGAG
ATATTAAGGTGCAACCGCAGCCTTCCAGTTTGCACGGAAGCATATCGCTG
GACTTCCAGGCCAGGGTGAAAACAGTGCACAGTGAGCTCTCCACCCAGTT
ATCAGCGGCCGGTCCCAGTCCGGATCGTCTGAAAAAGGCAGCGAAAAAGA
GCTATTCGAATGGTAGTGAACCGGAGATGCTCTCTCCCCTGACCAGCCCC
GTCCAAACGCCCACCAAGGATCAGAAGAAGCAGCGCAAGTCAACCACCTC
ACCGCAATCCAGTCCGGTCAGCAAGGACTGCGACAAGCTGGCACGAAACT
GGTTCCTCAGTCGCCTTAACAAGAGCACCGGATTGAAGGCGACCAACACG
GGCAGTGCATCACCAACCAACGCCAAGTGCAAGCAGAGCGAGAAGGAGAA
CCTGCTGACGGAAGCGGAGCTGGGCGAGGGCTATGATGCAAGTCCTGGTG
ATCGGTATCACGGCCTGCCGGGCAGCCCGCCCACGTCGCCGTGTCTGAAG
GCGGAGGCCAAGAGCAAGGTGAACATGATTATCAACCAGTTTGAGAGTAG
CGGTCACCTGTCCACCATGTTCAGCGTGGAAGCTTTGGCCGCCAATGCAC
TCGCCTCGCTGACATCCTTCTGCGAAAGTGATGGTTGCAACAACTACGAG
CCAATCATGCCCCTGGCCACGACTCCCAGCAGCTTTCTCAAGAAGGTGTA
GAAGCTTTCTAGACCAT
BS32389.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:48:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blow-RD | 1935 | CG1363-PD | 1..1935 | 17..1951 | 9615 | 99.8 | Plus |
| blow-RA | 1935 | CG1363-PA | 1..1935 | 17..1951 | 9615 | 99.8 | Plus |
| blow-RB | 1914 | CG1363-PB | 35..1914 | 72..1951 | 9340 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:48:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blow-RD | 2612 | CG1363-RD | 375..2311 | 16..1952 | 9625 | 99.8 | Plus |
| blow-RA | 2632 | CG1363-RA | 395..2331 | 16..1952 | 9625 | 99.8 | Plus |
| blow-RB | 2270 | CG1363-RB | 89..1969 | 72..1952 | 9345 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:48:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7580789..7582354 | 1952..387 | 7785 | 99.8 | Minus |
| 2R | 25286936 | 2R | 7582614..7582929 | 386..71 | 1565 | 99.7 | Minus |
| 2R | 25286936 | 2R | 7585056..7585111 | 71..16 | 280 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:48:19 has no hits.
BS32389.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:49:35 Download gff for
BS32389.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| blow-RA | 396..2330 | 17..1951 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:25 Download gff for
BS32389.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| blow-RA | 396..2330 | 17..1951 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:25 Download gff for
BS32389.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7580790..7582354 | 387..1951 | 99 | <- | Minus |
| 2R | 7582614..7582928 | 72..386 | 99 | <- | Minus |
| 2R | 7585056..7585110 | 17..71 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:49:35 Download gff for
BS32389.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3468295..3469859 | 387..1951 | 99 | <- | Minus |
| arm_2R | 3470119..3470433 | 72..386 | 99 | <- | Minus |
| arm_2R | 3472561..3472615 | 17..71 | 100 | | Minus |
BS32389.pep Sequence
Translation from 16 to 1950
> BS32389.pep
MNPKPTTTKLAEIEQFLLDVRAHFRASLETSEYENTSNLFHVTAAEQTAA
LLARCEILLAAASSASGSGSGLELGSGLGCADEQAAANHRSSLVDCVDSK
VGAETGPSGYLEMLASPSPSKSSLSASREYIDLGSSGSLDRCSVNQPVPA
AKDKEPHQQLYEICQGQGAGQDEDEAQQAITFTHEVFIDCPYADLPAGHL
SLQRSTKYGQLQRIVPKRLFFDQTRKCYCGILNDWMLCYADGPTACRPSS
TLYLKSSSIEIEHFGEGKRRDICFQITTDDPNKKFVYQANNEVDAKEWIH
AIEAAIRGDAGAHSALKTPPPRKLPTPPVQKKSTYTAADIIYEEPSPVYG
LIDSSSMVLPKLPEKSNSPSALARRFEYDVPKCPAQPLQDTSSRVASVSG
ELESLGLLNEGDIKVQPQPSSLHGSISLDFQARVKTVHSELSTQLSAAGP
SPDRLKKAAKKSYSNGSEPEMLSPLTSPVQTPTKDQKKQRKSTTSPQSSP
VSKDCDKLARNWFLSRLNKSTGLKATNTGSASPTNAKCKQSEKENLLTEA
ELGEGYDASPGDRYHGLPGSPPTSPCLKAEAKSKVNMIINQFESSGHLST
MFSVEALAANALASLTSFCESDGCNNYEPIMPLATTPSSFLKKV*
BS32389.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:41:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blow-PD | 644 | CG1363-PD | 1..644 | 1..644 | 3333 | 100 | Plus |
| blow-PA | 644 | CG1363-PA | 1..644 | 1..644 | 3333 | 100 | Plus |
| blow-PB | 637 | CG1363-PB | 13..637 | 20..644 | 3236 | 100 | Plus |
