BS32450.complete Sequence
806 bp assembled on 2013-05-22
GenBank Submission: KX800968
> BS32450.complete
GAAGTTATCAGTCGACATGTCGACTGTTTTGGCACAAAAGCTGTGGTGTA
CGCTTTGGTCAGCAGGATCACTAGGTCGCTTTGCACAGCACATGAGCAAC
GCTGCCCACCAGGTGAGCTGTATAGGCAGCGAGGAGCAGCGGGTGTACGA
GGAGCCACACGTAATCTTCCAGAACTGGCTGATGGCCGCCCAGAAGGAGG
CTCCTCAGGTGCGGCCTCGACTGGCCTGCATGGCCACGGTGGACAAGTCC
GGTGAGCCTGTGACCCGCCTAACCAGCATCGAGGAGGTCAATTCCCATGG
AATCACCTTCTTCACAACCCTCGGCAGTCGGCAGGCGGGCGAGATAAGCG
CCAATCCTCACGTGTCGCTACACTTCAACTGGGCGCCGCTCATGCGCAGT
GTTCGCATAGCAGGATCTGCTCACCAGCTAACGGAGGAGCAGGTTCGGGA
CCAGTTCCGACGATTTCCGCGCCACGTCCAGATGAGCATCACCCATGGAC
CACGATACGCTGCGGCCGAGTGGCAATCCCGATCCGGGTTCTTTGCGCGG
ATCGGACAGCGCTTGAACACCTGGCTTGGCAAGCAACCGGAGGAGATCCC
CATGCCGCACAACTGGGGAGGCTATATTCTTACACCCAGCCTATACGAAT
TCGGAATGCTAAGCGGCGAGAAGGCCGGTAGGACTCGGGTGCGATTCCGA
CGGTGTCTTGAAATGCCAAGGGGTACAAGAGTTGGTCACGTTCAAGCTGA
AAGGCAGGACTGGGTTTATGATTCGTGTGATGAAAATTGAAAGCTTTCTA
GACCAT
BS32450.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:39:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31473-RA | 774 | CG31473-PA | 1..774 | 17..790 | 3870 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:39:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31473-RA | 981 | CG31473-RA | 83..856 | 17..790 | 3870 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:39:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7811896..7812601 | 17..722 | 3530 | 100 | Plus |
| 3R | 32079331 | 3R | 7812815..7812884 | 721..790 | 350 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:39:23 has no hits.
BS32450.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 09:59:49 Download gff for
BS32450.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31473-RA | 83..855 | 17..789 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:11:15 Download gff for
BS32450.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31473-RA | 83..855 | 17..789 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:32:07 Download gff for
BS32450.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31473-RA | 83..855 | 17..789 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:32:07 Download gff for
BS32450.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7811896..7812600 | 17..721 | 100 | -> | Plus |
| 3R | 7812816..7812883 | 722..789 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:11:15 Download gff for
BS32450.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3638538..3638605 | 722..789 | 100 | | Plus |
| arm_3R | 3637618..3638322 | 17..721 | 100 | -> | Plus |
BS32450.pep Sequence
Translation from 16 to 789
> BS32450.pep
MSTVLAQKLWCTLWSAGSLGRFAQHMSNAAHQVSCIGSEEQRVYEEPHVI
FQNWLMAAQKEAPQVRPRLACMATVDKSGEPVTRLTSIEEVNSHGITFFT
TLGSRQAGEISANPHVSLHFNWAPLMRSVRIAGSAHQLTEEQVRDQFRRF
PRHVQMSITHGPRYAAAEWQSRSGFFARIGQRLNTWLGKQPEEIPMPHNW
GGYILTPSLYEFGMLSGEKAGRTRVRFRRCLEMPRGTRVGHVQAERQDWV
YDSCDEN*
BS32450.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:17:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31473-PA | 257 | CG31473-PA | 1..257 | 1..257 | 1381 | 100 | Plus |
| sgll-PB | 237 | CG31472-PB | 26..233 | 39..252 | 289 | 33.6 | Plus |
| sgll-PA | 246 | CG31472-PA | 35..242 | 39..252 | 289 | 33.6 | Plus |
