Clone BS32501 Report

Search the DGRC for BS32501

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:325
Well:1
Vector:pDNR-Dual
Associated Gene/TranscriptCG15308-RB
Protein status:BS32501.pep: full length peptide match
Sequenced Size:320

Clone Sequence Records

BS32501.complete Sequence

320 bp assembled on 2013-09-16

GenBank Submission: KX805823

> BS32501.complete
GAAGTTATCAGTCGACATGAAGTTCTTCATCGCCGCCTTCCTGATCGCCG
CCTGCATGGCCCTCGCCCAGTGCAGTGTCATCTACTCGCCGGTGTCCTCC
GTTCCGGTGGTCCGTTCCGTGCCCGTTATTCGCTCCGTTCCGGTGGTGCG
CAGTGTGCCTGTGGTCCGCCGTGTGCCGGTGGTTCGCCGTGTCAATGTGG
TCGAGTCCGTTCCAGTGGTGCCCTCGGTGGTGCGCGTTGGACAGGCCCCC
ATCTACGATGCTCCACTGGTGCAGTCCTATGGTGGATGGTTGAAGCAGAA
GTAGAAGCTTTCTAGACCAT

BS32501.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:55:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG15308-RB 288 CG15308-PB 1..288 17..304 1440 100 Plus
CG15308-RC 249 CG15308-PC 1..249 56..304 1245 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:55:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG15308-RB 532 CG15308-RB 60..350 15..305 1455 100 Plus
CG15308-RC 494 CG15308-RC 118..405 18..305 1425 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:55:37
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10218095..10218379 305..21 1425 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:55:38 has no hits.

BS32501.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:01:56 Download gff for BS32501.complete
Subject Subject Range Query Range Percent Splice Strand
CG15308-RB 62..349 17..304 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:41 Download gff for BS32501.complete
Subject Subject Range Query Range Percent Splice Strand
CG15308-RB 62..349 17..304 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:41 Download gff for BS32501.complete
Subject Subject Range Query Range Percent Splice Strand
X 10218096..10218382 17..304 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:01:56 Download gff for BS32501.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10112129..10112415 17..304 99   Minus

BS32501.pep Sequence

Translation from 16 to 303

> BS32501.pep
MKFFIAAFLIAACMALAQCSVIYSPVSSVPVVRSVPVIRSVPVVRSVPVV
RRVPVVRRVNVVESVPVVPSVVRVGQAPIYDAPLVQSYGGWLKQK*

BS32501.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG15308-PB 95 CG15308-PB 1..95 1..95 470 100 Plus
CG15308-PC 82 CG15308-PC 1..82 14..95 405 100 Plus
CG34268-PA 83 CG34268-PA 5..70 5..70 140 48.5 Plus