BS32503.complete Sequence
491 bp assembled on 2013-09-16
GenBank Submission: KX801526
> BS32503.complete
GAAGTTATCAGTCGACATGTCACAACGGAACTTCAAGATGCCAAATCCGA
ACAACGAATCCCATTCCTATTTCCTCCGGAATATTCCGGAAGAATTGCAG
CCTCAGTTTACGCGTGGATTCAATCAGTGGATGGGCAATCAGTCTACGAT
GACTAAGGGTTTGCCATCCAATACAGTGAATAAGTCTGCCCAGACGGCAT
CTGTCAATGATGGCAACTTGCAAGCTAGCGTGATCGCAATGCTGGCAGGA
ATGGACTCGATCTTGGACATGGAGCAGCCTAACAGAAGTCCTTCGCGCGA
AGAGCACGAGCGCCTAAATGAGCTGTTGTTCAGCAGCAATTTGCTCATGC
TGGACGTAAAGAAGCGAACGTTTCCCGTGGAGGACCCAACTGGGTATTTA
ACTTCGGTTTCAGAGCAAAATCCAGATGGGAATCCGTTGGCTAAGCGACT
AAAGCTAGAGCGTCCTCAGGGCTGAAAGCTTTCTAGACCAT
BS32503.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:55:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| jb-RC | 459 | CG15460-PC | 1..459 | 17..475 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:55:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| jb-RC | 591 | CG15460-RC | 38..497 | 16..475 | 2300 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:55:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20390440..20390769 | 345..16 | 1650 | 100 | Minus |
| X | 23542271 | X | 20390255..20390383 | 474..346 | 645 | 100 | Minus |
| X | 23542271 | X | 20383872..20384063 | 207..16 | 600 | 87.5 | Minus |
| X | 23542271 | X | 20383584..20383698 | 472..358 | 290 | 83.5 | Minus |
| X | 23542271 | X | 20383805..20383868 | 319..256 | 185 | 85.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:55:48 has no hits.
BS32503.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:02:00 Download gff for
BS32503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15460-RC | 39..496 | 17..474 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:46 Download gff for
BS32503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| jb-RC | 39..496 | 17..474 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:46 Download gff for
BS32503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20390440..20390768 | 17..345 | 100 | | Minus |
| X | 20390255..20390383 | 346..474 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:02:00 Download gff for
BS32503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20261282..20261410 | 346..474 | 100 | <- | Minus |
| arm_X | 20261467..20261795 | 17..345 | 100 | | Minus |
BS32503.pep Sequence
Translation from 16 to 474
> BS32503.pep
MSQRNFKMPNPNNESHSYFLRNIPEELQPQFTRGFNQWMGNQSTMTKGLP
SNTVNKSAQTASVNDGNLQASVIAMLAGMDSILDMEQPNRSPSREEHERL
NELLFSSNLLMLDVKKRTFPVEDPTGYLTSVSEQNPDGNPLAKRLKLERP
QG*
BS32503.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| jb-PC | 152 | CG15460-PC | 1..152 | 1..152 | 790 | 100 | Plus |
