BS32506.complete Sequence
737 bp assembled on 2013-09-16
GenBank Submission: KX804339
> BS32506.complete
GAAGTTATCAGTCGACATGGAGCGACTTAATTTGTCGAACAGGGCTCGCC
TGTTTTTCCACCTGTCGGCCACCGTTCACCTGGGCTATGCCATTTACTTT
GACTGTCGGTATGCCCAGTTGCCACAAGTGGCGGTGACCCTGCGCCTGGA
GCCACCGATTGGTGGCAAGTTTAAGTACATGACGTTTCTGTGCGGCCTTT
TGCAGTTGGGGTACTATACACTGGCGCTGACCTTTGACCTCCTCCGATTG
AGATCTCTAAGGAAGCTGCGAGACTACATCTTCGCCACCTTTGCCGTACC
TCTGGCCCTTACGGTGGGTCTCACCTTTTGGACACTCTTCGCCATCGATC
GGGAAGTGATATATCCGGTGCTTTTGGACCTGGTCTATCCCAATTGGCTG
AACCACACCATGCACACCTTCGTCGTAATCTATGCCTTTGTGGAGTTGGG
TATTACACGACATCAATATCCGAAACGCAGTCGAGGATTCACTGGACTGG
GTGCCTTCATGTTGGGATATCTGGTGTGGATACATATCGTTTGGTTCCGG
ACCGACATCTGGGTGTATCCCTTTCTGGGCGGCATCGCCTGGCAGCTGAG
AGTAATTTTCTTTGTCCTTATCATGGTCCTCGGATTCATTTACTATCTCT
TCGGCGAGCGAGTTAATAACGTCTTGTGGCAGCGATCTACTGGTGTCCAC
AGATGGATCGATTCCCATTGAAAGCTTTCTAGACCAT
BS32506.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:56:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6149-RB | 705 | CG6149-PB | 1..705 | 17..721 | 3525 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:56:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6149-RB | 782 | CG6149-RB | 16..722 | 17..723 | 3535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:56:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11434755..11435461 | 723..17 | 3535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:56:02 has no hits.
BS32506.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:02:04 Download gff for
BS32506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6149-RB | 16..719 | 17..720 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:51 Download gff for
BS32506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6149-RB | 16..719 | 17..720 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:51 Download gff for
BS32506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11434758..11435461 | 17..720 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:02:04 Download gff for
BS32506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11427858..11428561 | 17..720 | 100 | | Minus |
BS32506.pep Sequence
Translation from 16 to 720
> BS32506.pep
MERLNLSNRARLFFHLSATVHLGYAIYFDCRYAQLPQVAVTLRLEPPIGG
KFKYMTFLCGLLQLGYYTLALTFDLLRLRSLRKLRDYIFATFAVPLALTV
GLTFWTLFAIDREVIYPVLLDLVYPNWLNHTMHTFVVIYAFVELGITRHQ
YPKRSRGFTGLGAFMLGYLVWIHIVWFRTDIWVYPFLGGIAWQLRVIFFV
LIMVLGFIYYLFGERVNNVLWQRSTGVHRWIDSH*
BS32506.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6149-PB | 234 | CG6149-PB | 1..234 | 1..234 | 1254 | 100 | Plus |
| CG3625-PB | 248 | CG3625-PB | 18..238 | 11..223 | 527 | 43.4 | Plus |
| CG3625-PA | 245 | CG3625-PA | 23..235 | 11..223 | 471 | 39.4 | Plus |
| CG3625-PE | 247 | CG3625-PE | 8..237 | 9..223 | 422 | 37 | Plus |
| CG3625-PC | 247 | CG3625-PC | 8..237 | 9..223 | 422 | 37 | Plus |
