BS32507.complete Sequence
437 bp assembled on 2013-09-16
GenBank Submission: KX804928
> BS32507.complete
GAAGTTATCAGTCGACATGCGACTTTTTCCAGTTTACTTTGCTATAATCT
TCCTGTTTCAATATGATGTCTACTCCATATCGGATAATTTGAAAACCGAA
CTGCGATCCTGGTTTGGAAATATAAAGCAACTGCACAATCCGGCAACGCT
CAACACTCTGAAAATGCTGTGCGTTGTGGAAGTGATGCGGGGCAGCAAAC
ATCGGATAAATGTTGGCAATATTGACATTTTGAATAAGAATACTTTGGAA
AACTTCATCAAGCTGCCGAGCTTTAAAATGCCGAACATCACAATTGTCAT
CGTGGAAGACGAGTTGTCCAAGATTGCGAGAAGCGGGAGTCAGTATAAGG
AACGGGAAATGGAAAAGCTAGTTCAACATTTTAAGGAATGTATACTTGCA
AAACTTAAGGCACTATCTTAGAAGCTTTCTAGACCAT
BS32507.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:56:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1701-RB | 405 | CG1701-PB | 1..405 | 17..421 | 2025 | 100 | Plus |
| CG1701-RC | 405 | CG1701-PC | 1..405 | 17..421 | 2025 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:56:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1701-RB | 453 | CG1701-RB | 26..430 | 17..421 | 2025 | 100 | Plus |
| CG1701-RC | 952 | CG1701-RC | 26..430 | 17..421 | 2025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:56:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7408893..7409273 | 421..41 | 1905 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:56:07 has no hits.
BS32507.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:02:06 Download gff for
BS32507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1701-RC | 26..430 | 17..421 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:53 Download gff for
BS32507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1701-RC | 26..430 | 17..421 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:53 Download gff for
BS32507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7408893..7409272 | 42..421 | 100 | <- | Minus |
| 2R | 7409336..7409360 | 17..41 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:02:06 Download gff for
BS32507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3296398..3296777 | 42..421 | 100 | <- | Minus |
| arm_2R | 3296841..3296865 | 17..41 | 100 | | Minus |
BS32507.pep Sequence
Translation from 16 to 420
> BS32507.pep
MRLFPVYFAIIFLFQYDVYSISDNLKTELRSWFGNIKQLHNPATLNTLKM
LCVVEVMRGSKHRINVGNIDILNKNTLENFIKLPSFKMPNITIVIVEDEL
SKIARSGSQYKEREMEKLVQHFKECILAKLKALS*
BS32507.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1701-PB | 134 | CG1701-PB | 1..134 | 1..134 | 683 | 100 | Plus |
| CG1701-PC | 134 | CG1701-PC | 1..134 | 1..134 | 683 | 100 | Plus |
| CG11113-PB | 138 | CG11113-PB | 1..133 | 1..133 | 256 | 38.8 | Plus |
