Clone BS32508 Report

Search the DGRC for BS32508

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:325
Well:8
Vector:pDNR-Dual
Associated Gene/TranscriptCG42591-RA
Protein status:BS32508.pep: gold
Sequenced Size:512

Clone Sequence Records

BS32508.complete Sequence

512 bp assembled on 2013-09-16

GenBank Submission: KX805929

> BS32508.complete
GAAGTTATCAGTCGACATGGACATTCAGAAGAAAAATATGAAGTCACCTT
CGAAGGATTCATCTGATTCCCCTGATGAAAAGCGCAAGTCCTTAGAAATC
GTGCCCCTATTAAAACCAGTTACCTTCAGTATTTCATACAGCTTTGGATT
GAATTGGTATTTGATCAACATGGAAGACTACATTCCTCGGAGAAAGAGGA
GGTACTTCATCAACCTATCGCTCTTCACCGATCAACTGCATACTTTCATC
CAGAGCACTCTGCTCCTCCTAAAGCGCCCAAAATGGAGCACCATCTTTCT
GGCCACAACACCTCATAGCTTCACGTACTATCAAGCCCACTTCCCGATGA
AACCCATCCTGACATTCTCACCCATGATCAAGTCGACTTCGAAACTGGAA
TCTTGGAAGATTAAGGTAAAAGCCGGACATCCGCCCATGATAAACAATTC
TAGGCCATCAAGGTCAAGTTCAGTAGCAAGTCGGTCTCGCAAATAAAAGC
TTTCTAGACCAT

BS32508.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:56:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG42591-RA 480 CG42591-PA 1..480 17..496 2385 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:56:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG42591-RA 508 CG42591-RA 22..503 16..497 2395 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:56:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8069458..8069939 497..16 2395 99.8 Minus
Blast to na_te.dros performed on 2014-11-28 13:56:12 has no hits.

BS32508.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:02:08 Download gff for BS32508.complete
Subject Subject Range Query Range Percent Splice Strand
CG42591-RA 23..500 17..494 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:54 Download gff for BS32508.complete
Subject Subject Range Query Range Percent Splice Strand
CG42591-RA 23..500 17..494 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:54 Download gff for BS32508.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8069461..8069938 17..494 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:02:08 Download gff for BS32508.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8062561..8063038 17..494 99   Minus

BS32508.pep Sequence

Translation from 16 to 495

> BS32508.pep
MDIQKKNMKSPSKDSSDSPDEKRKSLEIVPLLKPVTFSISYSFGLNWYLI
NMEDYIPRRKRRYFINLSLFTDQLHTFIQSTLLLLKRPKWSTIFLATTPH
SFTYYQAHFPMKPILTFSPMIKSTSKLESWKIKVKAGHPPMINNSRPSRS
SSVASRSRK*

BS32508.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG42591-PA 159 CG42591-PA 1..159 1..159 827 100 Plus