BS32509.complete Sequence
836 bp assembled on 2013-09-16
GenBank Submission: KX802534
> BS32509.complete
GAAGTTATCAGTCGACATGAGAGTTTACCACTTGCTGCTGATTGGATTAG
TTTTGGCGACTATCGCCGGCGGTCATGAGGCTTTGGCACATCCGCCTAGA
GCCGATACCCCACCGTGTACTCCTCCCCCGGATCCGTGCACAACAACAAC
ATGCCCACCACCACCGCCGTGCACCACAACAACATGTCCACCACCAGAAC
CACCACCGTGCACCACAACAACATGCCCACCACCAGAACCACCACCGTGC
ACCACAACAACATGCCCACCACCACCACCTCCGTGCATTACTACAACGTG
CCCACCACCACCACCACCTCCACCACCACCACCACCACCACCGTGCACCA
GGACACCACCTCCATGCACCAGGACACCACCTCCATGCACCAGGACACCA
CCTCCATGCACCAGGACACCTCCTCCATGCACCAGGACACCACCCCCCTG
CACCAGGACACCTCCATGCACCACCACTCCTCCCTGCACCCCACCGTGCA
CCACCACCAAGCCCTGCACCACAACCGTTTGCACAACACCCAAGAGCGAC
AACGCTGGGCCAATTGTCGACGGAAATGAAGAACAGCCCGATATAGACAA
TCCAGTTGCTATTGCCCAGGTGCTGATCTCGCGCCACGATTGCCGTGGCC
AGGAGGACGGAACCTTCCTCGCCGACGTGCGTCACTGTCGCCGCTACTAC
GTGTGCAACCGTCAGAGGTCGAAGCGCCAGAACTGCCCCAACGGCTACTG
GTTCGATCGCGAGCTGAAGGCCTGCCGACTGGCCAGTACCGTCAACAACT
GTGACGCCAGGCGCAACTGAAAGCTTTCTAGACCAT
BS32509.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:56:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34324-RA | 804 | CG34324-PA | 1..804 | 17..820 | 4020 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:56:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34324-RA | 1035 | CG34324-RA | 51..856 | 15..820 | 4030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:56:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13456713..13457506 | 820..27 | 3970 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:56:18 has no hits.
BS32509.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:02:10 Download gff for
BS32509.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34324-RA | 53..855 | 17..819 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:56 Download gff for
BS32509.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34324-RA | 53..855 | 17..819 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:56 Download gff for
BS32509.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13456714..13457506 | 27..819 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:02:10 Download gff for
BS32509.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13350747..13351539 | 27..819 | 100 | | Minus |
BS32509.pep Sequence
Translation from 16 to 819
> BS32509.pep
MRVYHLLLIGLVLATIAGGHEALAHPPRADTPPCTPPPDPCTTTTCPPPP
PCTTTTCPPPEPPPCTTTTCPPPEPPPCTTTTCPPPPPPCITTTCPPPPP
PPPPPPPPPCTRTPPPCTRTPPPCTRTPPPCTRTPPPCTRTPPPCTRTPP
CTTTPPCTPPCTTTKPCTTTVCTTPKSDNAGPIVDGNEEQPDIDNPVAIA
QVLISRHDCRGQEDGTFLADVRHCRRYYVCNRQRSKRQNCPNGYWFDREL
KACRLASTVNNCDARRN*
BS32509.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34324-PA | 267 | CG34324-PA | 1..267 | 1..267 | 1608 | 100 | Plus |
CG34220-PA | 726 | CG34220-PA | 404..726 | 27..267 | 320 | 32.5 | Plus |
CG13731-PB | 792 | CG13731-PB | 98..266 | 26..176 | 283 | 45.7 | Plus |
CG5514-PC | 1109 | CG5514-PC | 390..558 | 27..191 | 283 | 39.1 | Plus |
CG5514-PA | 1109 | CG5514-PA | 390..558 | 27..191 | 283 | 39.1 | Plus |
CG13731-PB | 792 | CG13731-PB | 64..232 | 26..182 | 282 | 46 | Plus |
CG13731-PB | 792 | CG13731-PB | 140..322 | 26..175 | 276 | 43.7 | Plus |
CG13731-PB | 792 | CG13731-PB | 368..533 | 27..175 | 269 | 43.5 | Plus |
CG13731-PB | 792 | CG13731-PB | 36..205 | 36..198 | 262 | 42.2 | Plus |
CG5514-PC | 1109 | CG5514-PC | 403..497 | 26..116 | 262 | 50.5 | Plus |
CG5514-PC | 1109 | CG5514-PC | 366..501 | 27..160 | 261 | 40.7 | Plus |
CG13731-PB | 792 | CG13731-PB | 203..384 | 26..169 | 258 | 40.9 | Plus |
CG13731-PB | 792 | CG13731-PB | 397..554 | 26..175 | 254 | 41.8 | Plus |
CG13731-PB | 792 | CG13731-PB | 476..657 | 27..175 | 253 | 39.2 | Plus |
CG13731-PB | 792 | CG13731-PB | 221..425 | 28..175 | 249 | 40 | Plus |
CG13731-PB | 792 | CG13731-PB | 265..466 | 27..184 | 249 | 37.6 | Plus |
CG13731-PB | 792 | CG13731-PB | 430..636 | 26..175 | 245 | 39.6 | Plus |
CG13731-PB | 792 | CG13731-PB | 579..737 | 27..175 | 243 | 40.5 | Plus |
CG13731-PB | 792 | CG13731-PB | 421..595 | 28..169 | 239 | 40.2 | Plus |
CG13731-PB | 792 | CG13731-PB | 321..492 | 27..169 | 236 | 38.3 | Plus |
CG34220-PA | 726 | CG34220-PA | 168..335 | 31..174 | 231 | 39.3 | Plus |
CG13731-PB | 792 | CG13731-PB | 608..773 | 26..175 | 225 | 39.2 | Plus |
CG5514-PC | 1109 | CG5514-PC | 346..473 | 26..166 | 225 | 37.1 | Plus |
CG34220-PA | 726 | CG34220-PA | 155..308 | 31..174 | 222 | 39 | Plus |
CG5514-PC | 1109 | CG5514-PC | 416..500 | 26..109 | 220 | 50 | Plus |
CG13731-PB | 792 | CG13731-PB | 532..729 | 27..183 | 211 | 36.4 | Plus |
CG34220-PA | 726 | CG34220-PA | 140..293 | 31..174 | 210 | 40.3 | Plus |
CG34220-PA | 726 | CG34220-PA | 315..460 | 31..174 | 207 | 39.3 | Plus |
CG34220-PA | 726 | CG34220-PA | 323..467 | 31..174 | 207 | 37.3 | Plus |
CG34220-PA | 726 | CG34220-PA | 252..444 | 27..174 | 203 | 32.6 | Plus |
CG34220-PA | 726 | CG34220-PA | 1..160 | 1..174 | 200 | 35 | Plus |
CG34220-PA | 726 | CG34220-PA | 198..368 | 30..191 | 199 | 33.7 | Plus |
CG5514-PC | 1109 | CG5514-PC | 344..457 | 49..163 | 199 | 38 | Plus |
CG34220-PA | 726 | CG34220-PA | 363..558 | 21..174 | 198 | 32.8 | Plus |
CG34220-PA | 726 | CG34220-PA | 128..292 | 31..174 | 189 | 36.4 | Plus |
CG34220-PA | 726 | CG34220-PA | 214..382 | 26..196 | 174 | 33 | Plus |
CG5514-PC | 1109 | CG5514-PC | 430..501 | 26..102 | 157 | 44.3 | Plus |
CG13731-PB | 792 | CG13731-PB | 682..786 | 27..116 | 151 | 39 | Plus |