BS32510.complete Sequence
878 bp assembled on 2013-09-16
GenBank Submission: KX804363
> BS32510.complete
GAAGTTATCAGTCGACATGTCCGCTCCTGTAGAGGGTGTTCCCTATGAGG
AGATCCAGACAAAAGAGCTTATAGGCACCGGATTCTATGGCAGCGTATAC
AGGGCGGTCTGGAGAAATCGTGAGATCGCGCTGAAGAGAATTCGCGAGGG
ATGTGAGGATAAAAAGATTGAAAGAGAGATCTACCAGCTGACAAAGGCCA
GCCATGTCAACATAGTTGAGCTCTACGGCACATCGAGGCACGAGGGATGC
GCCCTGCTGTTGATGGAATTCGTAGACGGTGGATCTCTGTCCAGTTTTCT
GCACGCGAAAAGCAAGCCAAGTTATTCGCATGCCCACGCCTTCAACTGGG
CGCATCAGATCGCTCAGGGCATAGCCTATCTGCATGGCATGCAGCCGAAA
GCAGTAATTCATCGCGATATAAAGCCACTCAATACACTGCTATGCGAGAA
GGGACTCAAACTGAAGATTTGCGATTTCGGAACTGTTGTGGACCTATCCC
AATCGATATCGTGCAATGCGGGCACCTGCAGATACAAAGCGCCCGAGGTT
CTACAAGGAAATAAACCCGATGAAAAGTGCGATGTGTATAGTTGGGCTAT
TACCTTTTGGGAAATATTGTCGCGCAAGGAGCCATTTGAGCAATATAATA
CGCTTTTTGAACTGTACATGGCTATTAATGAAGGCGAGAGACCGGATTTA
AGTTGCATTATGTCTGGCTGCCCCGCGGATATAGTTGCTCTTTTGTACGC
TTCTTGGGATCCGGATATCAGCAAAAGATTTTCTATGGAACTGATTTCCC
AAAGCATGGGTAGAATCCTAAGTGAGGCGGGATCCATTCCACCACTGGAT
TTTTACTCATAAAAGCTTTCTAGACCAT
BS32510.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:55:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Takl2-RB | 846 | CG4803-PB | 1..846 | 17..862 | 4230 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:55:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Takl2-RB | 928 | CG4803-RB | 27..874 | 17..864 | 4240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:55:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22733407..22733709 | 368..66 | 1515 | 100 | Minus |
| 3R | 32079331 | 3R | 22732852..22733035 | 549..366 | 920 | 100 | Minus |
| 3R | 32079331 | 3R | 22732410..22732592 | 864..682 | 915 | 100 | Minus |
| 3R | 32079331 | 3R | 22732644..22732789 | 691..546 | 715 | 99.3 | Minus |
| 3R | 32079331 | 3R | 22733775..22733825 | 67..17 | 255 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:55:18 has no hits.
BS32510.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:01:48 Download gff for
BS32510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Takl2-RB | 27..870 | 17..860 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:34 Download gff for
BS32510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Takl2-RB | 27..870 | 17..860 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:34 Download gff for
BS32510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22732854..22733033 | 368..547 | 100 | <- | Minus |
| 3R | 22732652..22732787 | 548..683 | 100 | <- | Minus |
| 3R | 22733408..22733707 | 68..367 | 100 | <- | Minus |
| 3R | 22733775..22733825 | 17..67 | 100 | | Minus |
| 3R | 22732414..22732590 | 684..860 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:01:48 Download gff for
BS32510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18558374..18558509 | 548..683 | 100 | <- | Minus |
| arm_3R | 18558136..18558312 | 684..860 | 100 | <- | Minus |
| arm_3R | 18558576..18558755 | 368..547 | 100 | <- | Minus |
| arm_3R | 18559130..18559429 | 68..367 | 100 | <- | Minus |
| arm_3R | 18559497..18559547 | 17..67 | 100 | | Minus |
BS32510.pep Sequence
Translation from 16 to 861
> BS32510.pep
MSAPVEGVPYEEIQTKELIGTGFYGSVYRAVWRNREIALKRIREGCEDKK
IEREIYQLTKASHVNIVELYGTSRHEGCALLLMEFVDGGSLSSFLHAKSK
PSYSHAHAFNWAHQIAQGIAYLHGMQPKAVIHRDIKPLNTLLCEKGLKLK
ICDFGTVVDLSQSISCNAGTCRYKAPEVLQGNKPDEKCDVYSWAITFWEI
LSRKEPFEQYNTLFELYMAINEGERPDLSCIMSGCPADIVALLYASWDPD
ISKRFSMELISQSMGRILSEAGSIPPLDFYS*
BS32510.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Takl2-PB | 281 | CG4803-PB | 1..281 | 1..281 | 1490 | 100 | Plus |
| Tak1-PA | 678 | CG18492-PA | 14..273 | 8..270 | 644 | 47.1 | Plus |
| Takl1-PA | 393 | CG31421-PA | 2..283 | 5..278 | 432 | 36.6 | Plus |
| slpr-PD | 1148 | CG2272-PD | 124..402 | 8..280 | 293 | 30.1 | Plus |
| slpr-PC | 1148 | CG2272-PC | 124..402 | 8..280 | 293 | 30.1 | Plus |
