Clone BS32511 Report

Search the DGRC for BS32511

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:325
Well:11
Vector:pDNR-Dual
Associated Gene/TranscriptCG12826-RA
Protein status:BS32511.pep: gold
Sequenced Size:425

Clone Sequence Records

BS32511.complete Sequence

425 bp assembled on 2013-09-16

GenBank Submission: KX802295

> BS32511.complete
GAAGTTATCAGTCGACATGGATCTTAAGCAATTGTACTCGTGGATCTGCC
TGCTGATCAGCATCATCATCTGCAAAGTGTCCGAGGCCAAGCCCACCTAC
TACGACTTGGATAGCTACGAAAACTACGACACAGATCGCTATGACAGCTA
CGGCGGGTCCTCGTACGCCCTGACCTACGGGAAACCGTTAACGGACAACC
GCCTTAAGAAGCTGAGTCCGGGCTACTACTACGTGGACGATGGGTACATC
GCCCCGGTGGCCTCCAGCGCCGGCTACACCCGCCGCGAGGGCGTCTCCGC
CTCCGACAGTGGCTCCTTGCCCCACAATGTCAAGTTTACTCCCATCGTGC
GCGTCCGGCAGACCAAGACCAAGCGCAAGAAGCTCTTCGTGCCCAACTTC
TTTGGCTAGAAGCTTTCTAGACCAT

BS32511.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:55:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG12826-RA 393 CG12826-PA 1..393 17..409 1965 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:55:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG12826-RA 717 CG12826-RA 102..495 17..410 1970 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:55:28
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7670549..7670932 410..27 1920 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:55:29 has no hits.

BS32511.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:01:52 Download gff for BS32511.complete
Subject Subject Range Query Range Percent Splice Strand
CG12826-RA 102..494 17..409 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:38 Download gff for BS32511.complete
Subject Subject Range Query Range Percent Splice Strand
CG12826-RA 102..494 17..409 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:38 Download gff for BS32511.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7670550..7670937 22..409 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:01:52 Download gff for BS32511.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3558055..3558442 22..409 99   Minus

BS32511.pep Sequence

Translation from 16 to 408

> BS32511.pep
MDLKQLYSWICLLISIIICKVSEAKPTYYDLDSYENYDTDRYDSYGGSSY
ALTYGKPLTDNRLKKLSPGYYYVDDGYIAPVASSAGYTRREGVSASDSGS
LPHNVKFTPIVRVRQTKTKRKKLFVPNFFG*

BS32511.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG12826-PA 130 CG12826-PA 1..130 1..130 690 100 Plus