BS32514.complete Sequence
3149 bp assembled on 2013-11-09
GenBank Submission: KX800902
> BS32514.complete
GAAGTTATCAGTCGACATGCCCTCGGCAAAGGAAAAACGATTGCGCAGGG
AAAGAATACTACAGTTCATACGCGAAAATAGGGAGCTCATGCCCATTAGT
TCGACGACAGTACTAAAGCCACCTACGGTTAAAAAAGAGGACACTTTAAA
GCAAAAAAAACGTGTCACATTTACCCATGGCAAACAGAGGAGTATTGGGG
AGTCGACCAGAAACAAGGATAACGAGCAGAATATTGGTCAGGGCCTAACG
TCCTGTTTGATCACCAGGTCCTCGGATACCCGATTAGCCAGCGGAGCCAA
CAACCCAACAGAGATTACGGCGGAAAAACTCCATCGAACCGACAGCAAAA
GCCATTTGAAGACGTCATGCACAAAATGCCAAGACTCTCGATTATCGGCT
GGTACAAATAATCCAGCGGCGCGAGATGTTGGCAAATTACCACGAACCGA
CAGCGAGTGCAAGTTCAACGAGCCCGGAATCTTTTTTCTGCAGAAACCCC
ATTCGGATTTTACCACTCAGGAAGTCAAGCTGAACGCAAAGCCTATAAGA
AAGGAGTTGAAGAACAAGTGCGACTTCTTTCCGAAATATGTGGACAATCG
ACCATTCAAGGATGAGGCGACACAAACCCTCTATAGGGAATCTTCTGCGC
AGACTTTGGCCTTTTTACCTGAAATACTGAACAAGGACAAGTCGGAAACT
TTTGAGCTTTATACACTGGCCAAATTGCTGCCAGGCGACAAGCCACCGGG
ATTGCATGAGGTGGAGTTTTTGGAGCGGGCCCGTCGACGATGGAAATTCA
GTAAGGCACTGAAGGATAACTTTAAACGACTTCTTTGTGAGGCGAGGGAA
GTGTCTATCAAAACGCAGTACAAGGAGATTCTGGAAGCCTTCGAATGGGA
GCAGTGGATACAGCGCGAGGAGGACATACAGCAGTGCCAGATGATGCGCC
TGGAAATCGTGATCAAGATGTTTGACAAAAGAGAGAAGGAAATGCACAAC
GCCTCCAAGGCTCGAATTGAAAAGTCCGTACAGCAAATAGAAAAGCGTCG
GCAGGATGGTCTGCGCAAGAACGAAATTGAATACCAGCGGGGAATGCGAC
GCAACAACATTCAGTTGGCTAAAACCGCTCGAAAGTGGGAGAAACAGAGC
CCCATGCAGGCACTTGGATCACCGTGCTCCGAGTTCTACGGCCCACTGAT
AAGGTATGGTGTTGATCCAGCCCGAAGATGCTTTGAATCCAACACTGGAC
GCAAAGCATTCGACATGAGGATCGATGAACTGGAAAAGCGGGTGAACATG
CGCAATGTGCAGTGCCCCTTCAGCAAGCTGAAGGAGTGGTCCAAGCCCAA
GGAGTACGATAGAGAGTATGAACGCAACTTCTGCAATGATGGCAATCTCC
AAAGGCTGTACGAGTCCTTGAAGACATTGAGAACGCAGGCCGACATGGCA
AAGGAGCCACCGCAGTGCCTGAAGACACGATTGCGAATTGAGCATCGCAC
ATCTAGTTCCAGTTCCACCGATTCATATCGCAACTACAATTGGCAAGCTC
GCAAATCACGCTTTGTGGAACTTTCCGAGGGATTACGTAGCACCAAGACA
ACAATCAAAAAAATGGCCCCACAAAGAGCTGAGAAGTTAGTTAGGGGCTC
TGTCATTAGGCGCGAATATTTGGAGACACTGATATGCTCATACGAAGGCA
GTTATGTTGGCACAATGATGCAGTTCCTGGCAGATGAAATGCAACGATTG
AAGGAGCAGCGCAAGCTGCACTTCTTTTGCATCCTGGCACAAAAGGAGCG
CTGGCGCCGTGAAGCAGCGGAAGCGGGATTGAGGCAGAAGGAGAACTGCA
TGAGAATGCTCTACGAGGAGATGTTTCAGTTTACAAATTCAGTGCACAGT
GAGATTGCTGAGAAATATGCCGACACCATATTGACCACCGATGTGGGCAA
CATGGTGGAGGAGGAGACAGCCGAAACTATTACCGAGCTGGCTAAGCAAA
TCGATGCGGACATAGAGAGGTGGCTGGAGTCCTTCAAACTGATCCAGAAT
CCACTCAATTTCACCCCACTTCGTCTCATGCTGCAGGACATGGTCTCACC
GGATATGGGCGCTACGCTACGGCGCTACGAGACATCCCTGATTGTCCAGT
ACATTGTAGAGGACGTGATCTTCTACAATTTGTGGCAGGAACTCGAGCCA
TTCGATATTGCCAGCACTTTGACCAGTGATCTGATCGATCGCCTTATTGA
CAACGATCTGTTTTTGTTCTCATCGGACAGCGAAAGCGATTCTGGACATG
GAGCCTCCTGGACAGAGTCCCATGCCATCATACGAAAGCTCATTCGCCAA
GCTGTTCCGGGTAGACGCTGGAAGGAGGAAAACGAGAGGATTGTCACCGA
AACCTTTAGCAGCCTGTTTGACGATGTGTTTGCCCAGATCCTATTTGGCA
TCGAAAATCCGGAACCAGTTCGGGGCACCGAACTTTTGCACCTTTGTGCA
AGTAAATCGTATGCCTTCCTCCCTCACGAGATTCCAAGTAGAGTTCCTTT
GGAAAAGTTGGAGTCGTCCCAATCGGAGTCATTGGAGAATGCTAATATTC
TACGAATGCAATTCCTATCGCTCATTAAAAAAATTAAAGAAGATAAGATA
ACCAAAAAGTTGGAGAGAACTGGGGAGAAAGTGAAGATGTCTGCAAATGA
ATACGAATTATTTGACGACTATATCAAAAACGAAGTGCTCCAAAATGCGG
AACTCCTTAACAGTGTGTCTCCGGTGCCAGAGCCTGAATTATGTTCCATC
ATAAGTACTGTTGATATTACCGAGTACGACAATAATCTAAAAGATCTGCG
AGGTTCCTCGATTATTCAGCGTTCGCCTTCAGCCGAAGAGGAGGCCTTTG
AAAGTAAAGACGAAGAAGTTAGATCGGACAATTTCAATGAATTCATCAAC
GTAGACCAGGAAAAAGTTGAAGATGCAGAACCAGAACAAGAGAATGTATC
TGAAAATTCGGGAAGGGAATCTGACGACTTAGAATCCATAATTGGCGAAG
AATTTGAGGAAGAGCATACCGATATGGCCGAAGAGGTCGTGGTTTACTCC
ACCAAAGAATCGCAGGTCTTTAAATTCAGATAAAAGCTTTCTAGACCAT
BS32514.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:33:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15144-RB | 3117 | CG15144-PB | 1..3117 | 17..3133 | 15585 | 100 | Plus |
| CG15143-RA | 3459 | CG15143-PA | 540..1202 | 745..1407 | 615 | 72.9 | Plus |
| CG15145-RA | 2631 | CG15145-PA | 1546..2211 | 1715..2380 | 585 | 72.5 | Plus |
| CG15143-RA | 3459 | CG15143-PA | 1891..2162 | 2087..2358 | 250 | 72.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15144-RB | 3362 | CG15144-RB | 128..3245 | 17..3134 | 15590 | 100 | Plus |
| CG15143-RA | 3513 | CG15143-RA | 568..1230 | 745..1407 | 615 | 72.9 | Plus |
| CG15145-RA | 2787 | CG15145-RA | 1546..2211 | 1715..2380 | 585 | 72.5 | Plus |
| CG15143-RA | 3513 | CG15143-RA | 1919..2190 | 2087..2358 | 250 | 72.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17525702..17528202 | 3134..634 | 12505 | 100 | Minus |
| 2L | 23513712 | 2L | 17528718..17528995 | 294..17 | 1390 | 100 | Minus |
| 2L | 23513712 | 2L | 17528257..17528493 | 637..401 | 1185 | 100 | Minus |
| 2L | 23513712 | 2L | 17523175..17523837 | 1407..745 | 615 | 72.9 | Minus |
| 2L | 23513712 | 2L | 17529887..17530552 | 2380..1715 | 585 | 72.5 | Minus |
| 2L | 23513712 | 2L | 17528557..17528667 | 403..293 | 555 | 100 | Minus |
| 2L | 23513712 | 2L | 17531054..17531390 | 1219..883 | 395 | 74.5 | Minus |
| 2L | 23513712 | 2L | 17522215..17522486 | 2358..2087 | 250 | 72.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:33:49 has no hits.
BS32514.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-11-09 12:26:28 Download gff for
BS32514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15144-RB | 76..3190 | 17..3131 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:17:08 Download gff for
BS32514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15144-RB | 128..3242 | 17..3131 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:17:08 Download gff for
BS32514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17528258..17528492 | 402..636 | 100 | <- | Minus |
| 2L | 17528559..17528666 | 294..401 | 100 | <- | Minus |
| 2L | 17528719..17528995 | 17..293 | 100 | | Minus |
| 2L | 17525705..17528199 | 637..3131 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-11-09 12:26:28 Download gff for
BS32514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17528559..17528666 | 294..401 | 100 | <- | Minus |
| arm_2L | 17525705..17528199 | 637..3131 | 100 | <- | Minus |
| arm_2L | 17528258..17528492 | 402..636 | 100 | <- | Minus |
| arm_2L | 17528719..17528995 | 17..293 | 100 | | Minus |
BS32514.pep Sequence
Translation from 16 to 3132
> BS32514.pep
MPSAKEKRLRRERILQFIRENRELMPISSTTVLKPPTVKKEDTLKQKKRV
TFTHGKQRSIGESTRNKDNEQNIGQGLTSCLITRSSDTRLASGANNPTEI
TAEKLHRTDSKSHLKTSCTKCQDSRLSAGTNNPAARDVGKLPRTDSECKF
NEPGIFFLQKPHSDFTTQEVKLNAKPIRKELKNKCDFFPKYVDNRPFKDE
ATQTLYRESSAQTLAFLPEILNKDKSETFELYTLAKLLPGDKPPGLHEVE
FLERARRRWKFSKALKDNFKRLLCEAREVSIKTQYKEILEAFEWEQWIQR
EEDIQQCQMMRLEIVIKMFDKREKEMHNASKARIEKSVQQIEKRRQDGLR
KNEIEYQRGMRRNNIQLAKTARKWEKQSPMQALGSPCSEFYGPLIRYGVD
PARRCFESNTGRKAFDMRIDELEKRVNMRNVQCPFSKLKEWSKPKEYDRE
YERNFCNDGNLQRLYESLKTLRTQADMAKEPPQCLKTRLRIEHRTSSSSS
TDSYRNYNWQARKSRFVELSEGLRSTKTTIKKMAPQRAEKLVRGSVIRRE
YLETLICSYEGSYVGTMMQFLADEMQRLKEQRKLHFFCILAQKERWRREA
AEAGLRQKENCMRMLYEEMFQFTNSVHSEIAEKYADTILTTDVGNMVEEE
TAETITELAKQIDADIERWLESFKLIQNPLNFTPLRLMLQDMVSPDMGAT
LRRYETSLIVQYIVEDVIFYNLWQELEPFDIASTLTSDLIDRLIDNDLFL
FSSDSESDSGHGASWTESHAIIRKLIRQAVPGRRWKEENERIVTETFSSL
FDDVFAQILFGIENPEPVRGTELLHLCASKSYAFLPHEIPSRVPLEKLES
SQSESLENANILRMQFLSLIKKIKEDKITKKLERTGEKVKMSANEYELFD
DYIKNEVLQNAELLNSVSPVPEPELCSIISTVDITEYDNNLKDLRGSSII
QRSPSAEEEAFESKDEEVRSDNFNEFINVDQEKVEDAEPEQENVSENSGR
ESDDLESIIGEEFEEEHTDMAEEVVVYSTKESQVFKFR*
BS32514.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15144-PB | 1038 | CG15144-PB | 1..1038 | 1..1038 | 5348 | 100 | Plus |
| CG15143-PA | 1152 | CG15143-PA | 59..926 | 123..1003 | 2259 | 52 | Plus |
| CG15145-PA | 876 | CG15145-PA | 7..823 | 4..872 | 2133 | 51.9 | Plus |
