Clone BS32518 Report

Search the DGRC for BS32518

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:325
Well:18
Vector:pDNR-Dual
Associated Gene/TranscriptCG43062-RA
Protein status:BS32518.pep: full length peptide match
Sequenced Size:557

Clone Sequence Records

BS32518.complete Sequence

557 bp assembled on 2013-09-16

GenBank Submission: KX806383

> BS32518.complete
GAAGTTATCAGTCGACATGGGAATAAGCCCACAATGCTGGCCAATCAAGA
ATAAGACATTCGTGTTTTTGTGCCGGGGCATACACGAAAGAAGGTCAAAG
AAAAAGACACTTTCAACGTATTATACTCTTCCCCATTACCACAATCAGGA
CGAAAACCACAAGTACGCCTTTTTCCATGTGGAAAACGATTCTCGAGTTT
TCTTCATTACAATTGGGAGAAGCCGGCTAAACAATCTCGATTGGTTTCTA
GTGGATAAATGGGGCAAATTCATTCGAAATGGGACATCAGTCTACGATTA
CCACACGGGCTTCGAGTGCGTGTACAAAAGGATCCATTTCTTGGAGAGAC
TGCTTAAAGAATGCTTGGCTAAGCAAAATTCCACGCAAAGGAACAGCACG
AATCCCGAGTTGATGGTTCTACACTTCCCGGAAACGAAGGCACCAACCTA
CCACATGGTATCCATTGGAGACAATACGCGGTGCTTGAACTGGGTTATCT
GCCTGCTGGGACTGGTTATACTTCTCTGCTGCCTGAAATAAAAGCTTTCT
AGACCAT

BS32518.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:56:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG43062-RA 525 CG43062-PA 1..525 17..541 2625 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:56:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG43062-RA 584 CG43062-RA 41..568 15..542 2640 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:56:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11750373..11750900 15..542 2640 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:56:37 has no hits.

BS32518.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:02:18 Download gff for BS32518.complete
Subject Subject Range Query Range Percent Splice Strand
CG43062-RA 43..565 17..539 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:02 Download gff for BS32518.complete
Subject Subject Range Query Range Percent Splice Strand
CG43062-RA 43..565 17..539 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:02 Download gff for BS32518.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11750375..11750897 17..539 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:02:18 Download gff for BS32518.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7576097..7576619 17..539 100   Plus

BS32518.pep Sequence

Translation from 16 to 540

> BS32518.pep
MGISPQCWPIKNKTFVFLCRGIHERRSKKKTLSTYYTLPHYHNQDENHKY
AFFHVENDSRVFFITIGRSRLNNLDWFLVDKWGKFIRNGTSVYDYHTGFE
CVYKRIHFLERLLKECLAKQNSTQRNSTNPELMVLHFPETKAPTYHMVSI
GDNTRCLNWVICLLGLVILLCCLK*

BS32518.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG43062-PA 174 CG43062-PA 1..174 1..174 967 100 Plus