BS32521.complete Sequence
437 bp assembled on 2013-09-16
GenBank Submission: KX804380
> BS32521.complete
GAAGTTATCAGTCGACATGCCGCCCTGGCGTGGTGAACTTCCAATGGCCG
CGTTCCTCGCCAACTCCAAGCAGTACTTGCGACCATTGAGCAGCGCCATC
ATCAGCCAGAGCCAGACTTTGGCCGCTCAGAACACAACCCCCGTTGCATT
GCTGCCACAGATCAGGTCATTCCAGACCTCGCCAGTCACGCGTGACATTG
ACTCGGCCGCCAAATTCATTGGTGCTGGTGCCGCAACAGTCGGTGTCGCT
GGATCCGGTGCTGGTATCGGAACAGTATTCGGTTCCCTCATCATCGGCTA
CGCCAGGAACCCATCGCTGAAACAGCAGCTGTTCTCCTACGCCATTCTGG
GCTTCGCCCTGTCCGAGGCCATGGGTCTGTTCTGTTTGATGATGGCCTTC
CTGCTGCTGTTCGCCTTCTAAAAGCTTTCTAGACCAT
BS32521.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:56:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1746-RF | 405 | CG1746-PF | 1..405 | 17..421 | 2025 | 100 | Plus |
| CG1746-RG | 417 | CG1746-PG | 45..417 | 49..421 | 1850 | 99.7 | Plus |
| CG1746-RE | 417 | CG1746-PE | 45..417 | 49..421 | 1850 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:56:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1746-RF | 1350 | CG1746-RF | 77..481 | 17..421 | 2025 | 100 | Plus |
| CG1746-RG | 722 | CG1746-RG | 106..478 | 49..421 | 1850 | 99.7 | Plus |
| CG1746-RE | 1730 | CG1746-RE | 489..861 | 49..421 | 1850 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:56:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31217738..31217945 | 259..52 | 1040 | 100 | Minus |
| 3R | 32079331 | 3R | 31217014..31217178 | 421..257 | 825 | 100 | Minus |
| 3R | 32079331 | 3R | 31218793..31218828 | 52..17 | 180 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:56:52 has no hits.
BS32521.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:02:23 Download gff for
BS32521.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1746-RF | 77..479 | 17..419 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:08 Download gff for
BS32521.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1746-RF | 77..479 | 17..419 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:08 Download gff for
BS32521.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31217016..31217177 | 258..419 | 100 | <- | Minus |
| 3R | 31217740..31217944 | 53..257 | 100 | <- | Minus |
| 3R | 31218793..31218828 | 17..52 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:02:23 Download gff for
BS32521.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27042738..27042899 | 258..419 | 100 | <- | Minus |
| arm_3R | 27043462..27043666 | 53..257 | 100 | <- | Minus |
| arm_3R | 27044515..27044550 | 17..52 | 100 | | Minus |
BS32521.pep Sequence
Translation from 16 to 420
> BS32521.pep
MPPWRGELPMAAFLANSKQYLRPLSSAIISQSQTLAAQNTTPVALLPQIR
SFQTSPVTRDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPS
LKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF*
BS32521.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1746-PF | 134 | CG1746-PF | 1..134 | 1..134 | 665 | 100 | Plus |
| CG1746-PG | 138 | CG1746-PG | 15..138 | 11..134 | 600 | 99.2 | Plus |
| CG1746-PE | 138 | CG1746-PE | 15..138 | 11..134 | 600 | 99.2 | Plus |
| CG1746-PB | 138 | CG1746-PB | 15..138 | 11..134 | 600 | 99.2 | Plus |
| CG1746-PC | 138 | CG1746-PC | 15..138 | 11..134 | 600 | 99.2 | Plus |
