BS32524.complete Sequence
1238 bp assembled on 2013-09-16
GenBank Submission: KX805107
> BS32524.complete
GAAGTTATCAGTCGACATGATGCAAGTGCCCCTGCAACGCTGTTCGTGCG
TCTTGGCAGTTTTGGTGTTGCTCTGGAGTGGCGGATTAGCCCAGTTGCAA
GTCCAGGCTCAAAGTGGATACAACTATGGGCGTCCCGAGGTAGCCAATGT
AGGAGGAGCCACAGCTGGTGGTCGCTTGACACCTGCACCATATCCAACAG
CACCAGCCCTGCCACTTACTCCCGCTCCGGCTCCTACTGCATATGGAGCA
GGCTTGTTTCCCTCACCCGCTGTTGGATTTACGCCAAGTGGACAGGCTAC
CACTGCTTTTGGAGCACCCGCCATTGTAGGAGCCACAAACCCCGTTAACC
CACCGAGAAGAACTTCATCTGGCGGATTATCTACCCCATCATCTCGCAGT
GGACCCTATGGACCGCAGGCTTCGCAGTATGGAGGTACTCCCGGTGGATC
TCCAATCCGAGTTGCTAGTGGAACGGGAGACAGCGGGGACTACAACGATT
CCGATGGAGACTACTCGGCCATTCCGGGTGTTCCTGGAGTGGATTATCCT
ATTTATGCCCAGGTGCCGCGCACCAACTTTGACTGTGCGCAACAGCCCCT
ACCCGGCTATTATGCGGACATAGAGGCCCAATGCCAGGTGTTCCATATCT
GTGCCCTCAACCGGACCTACTCCTTCCTGTGTCCCAATGGCACAGTCTTC
AGCCAGGAGACATTAGTCTGTGTGTGGTGGAACCAGTACGACTGCGTTTC
GGCGCCCAGCTTATATGCGAACAATGCCTATATCTATGATTACTCCGAGA
GAAGTGGCTCCAATCTGAGAACATCGAATACCAACAACGTCTACCGTCCG
GCCGCTTCTTCCTCGGCTGCCTTCGGGGCACCTCTGGCCACGACTGGAAC
ACTTCGAGCCACCGGAGTGTCTCAGGTTGCTGGATATAACTCCGGCCGGG
GGTCCTATCCTTCAGCCACGCCCACCCCAACCGCTCAGCCCCAAAGCCCG
TATGGCGCTGGGGCTGTCCTTCGTCCCGCCATTGTCCCGAGCACTGGAGC
CAATCGATTACCGCCATCGGGAGCTGCTGTCGGGCTTCTGGCCACTGCCG
CCGGAGCTCTTCCCGAGAGTTCAGTGGCTGGATTCGGGCAACAGCAGTCG
GGCGGGAATAGAGAGTATCTGCCACCAGCTAGCGTTGGACAACAGCGACA
ACGAGGAGGCACCAATGCATAGAAGCTTTCTAGACCAT
BS32524.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:56:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14607-RB | 1206 | CG14607-PB | 1..1206 | 17..1222 | 6030 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:56:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14607-RB | 1472 | CG14607-RB | 101..1307 | 16..1222 | 6035 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:56:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7242724..7243841 | 105..1222 | 5590 | 100 | Plus |
| 3R | 32079331 | 3R | 7242625..7242675 | 57..107 | 255 | 100 | Plus |
| 3R | 32079331 | 3R | 7241860..7241903 | 16..59 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:56:28 has no hits.
BS32524.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:02:14 Download gff for
BS32524.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14607-RB | 102..1307 | 17..1222 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:00 Download gff for
BS32524.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14607-RB | 102..1307 | 17..1222 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:00 Download gff for
BS32524.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7241861..7241903 | 17..59 | 100 | -> | Plus |
| 3R | 7242628..7242674 | 60..106 | 100 | -> | Plus |
| 3R | 7242726..7243841 | 107..1222 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:02:14 Download gff for
BS32524.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3067583..3067625 | 17..59 | 100 | -> | Plus |
| arm_3R | 3068350..3068396 | 60..106 | 100 | -> | Plus |
| arm_3R | 3068448..3069563 | 107..1222 | 100 | | Plus |
BS32524.pep Sequence
Translation from 16 to 1221
> BS32524.pep
MMQVPLQRCSCVLAVLVLLWSGGLAQLQVQAQSGYNYGRPEVANVGGATA
GGRLTPAPYPTAPALPLTPAPAPTAYGAGLFPSPAVGFTPSGQATTAFGA
PAIVGATNPVNPPRRTSSGGLSTPSSRSGPYGPQASQYGGTPGGSPIRVA
SGTGDSGDYNDSDGDYSAIPGVPGVDYPIYAQVPRTNFDCAQQPLPGYYA
DIEAQCQVFHICALNRTYSFLCPNGTVFSQETLVCVWWNQYDCVSAPSLY
ANNAYIYDYSERSGSNLRTSNTNNVYRPAASSSAAFGAPLATTGTLRATG
VSQVAGYNSGRGSYPSATPTPTAQPQSPYGAGAVLRPAIVPSTGANRLPP
SGAAVGLLATAAGALPESSVAGFGQQQSGGNREYLPPASVGQQRQRGGTN
A*
BS32524.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14607-PB | 401 | CG14607-PB | 1..401 | 1..401 | 2127 | 100 | Plus |
| CG14608-PC | 1137 | CG14608-PC | 79..224 | 160..319 | 270 | 38.7 | Plus |
| CG14301-PB | 196 | CG14301-PB | 82..172 | 168..257 | 267 | 53.8 | Plus |
| CG14304-PC | 942 | CG14304-PC | 650..739 | 171..259 | 253 | 48.9 | Plus |
| CG32036-PC | 173 | CG32036-PC | 41..141 | 159..254 | 241 | 44.6 | Plus |
