BS32529.complete Sequence
1253 bp assembled on 2013-09-16
GenBank Submission: KX804537
> BS32529.complete
GAAGTTATCAGTCGACATGCTTAAAAGCTGTCATTTAAACTACTGCTATG
GCATTTTGATTAGCCTTTTCATTTTCTGTGATACCGCTTCCGGCGATTTG
ATTAAGGTCGACAAAACTATATTGGAGGATGCCAATCTGATCACGCCGGA
TTTGATCAAGAAGTATGGTTATCCTGCTGAAACGCATAAGATCCAGGCCA
AGGATGGCTTCGTCCTTACGGCTCATCGGATTCCCAAGCCCGGAGGACAA
CCCGTGTTATTGGTACATGGCCTGCTGGACAGCTCGGTGGCATATGTGAT
ACTGGGTCCCGAAAGATCCTTGGGCTTCCTGCTTAGCGATATGGGATACG
ATGTTTGGTTGCTAAACACGCGGGGAAATAGGTATTCCCGGAAGCACAAG
CGATATCATCGATACCAGCCGCAGTTCTGGGACTTCTCCTTCCATGAGCT
CGGAGTGTACGATCTTCCGGCGGCCATTGATTACGTTCTTGCAAGGAGCA
AGGACTTCGAACAGATCCACTATGTGGGCCACTCACAGGGAACTACATCC
TTCTTTGTGATGGGCAGTGAGAGATCGGCCTATATGAAAAAGATCAAACT
TATGCAGGCTCTGGCTCCGGTTGTCTTTTGGGACTACATCGATTCACCGA
TTATACTCACTTTTGTGAAGTATTTGAGACCATTAGTGTTTATTGCCAGA
TCGTTTGGAATATACGAATTTCCGCCGGAGAACGAAGTGTGGCGAAGCCT
GATACATAAGATCTGCAGCTTCGTCTTCCAGAATACCTGCACCTATTTCC
TGATGGAAGCCATGGGCGTGGACTACGCACAATTCAACTCCAGCCTTCTT
CCGCTCTTCACGGGACATGCATCCTCCGGATCATCGGTTAAGTCTCTGGA
GCACTATGGCCAGCAGATCCACAGCGGTGGGTTTTTCAAGTACAATTACT
ACAGCACCTGGGAGAATCGAAGAAACCACGGCGTCGACACTCCGCCACAG
TACAAACTCACTAATGTCGACTGCAAAGTGGCATTGTACTACAGTAGAAA
CGATCGTCTAACATCCGACAAGGATGTGGTTCGATTACGTGATATCCTGC
CAAATGTAGTGCTCGATTACATGTTTCCCGATCCTTTGTACAACCACATC
AACTTCATTTGGGGAAATGATGTGAAAACCGTTCTCAACGATCGCATGAT
AGAACTAATGCGAAAAGTTGACAATGGCGAAGTGTAGAAGCTTTCTAGAC
CAT
BS32529.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:57:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18302-RA | 1221 | CG18302-PA | 1..1221 | 17..1237 | 6105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:57:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18302-RA | 2144 | CG18302-RA | 652..1872 | 17..1237 | 6105 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:57:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10535766..10536315 | 688..1237 | 2750 | 100 | Plus |
2L | 23513712 | 2L | 10535160..10535703 | 145..688 | 2720 | 100 | Plus |
2L | 23513712 | 2L | 10534973..10535101 | 17..145 | 645 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:57:13 has no hits.
BS32529.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:02:33 Download gff for
BS32529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18302-RA | 652..1872 | 17..1237 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:15 Download gff for
BS32529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18302-RA | 652..1872 | 17..1237 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:15 Download gff for
BS32529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10534973..10535101 | 17..145 | 100 | -> | Plus |
2L | 10535161..10535703 | 146..688 | 100 | -> | Plus |
2L | 10535767..10536315 | 689..1237 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:02:33 Download gff for
BS32529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10534973..10535101 | 17..145 | 100 | -> | Plus |
arm_2L | 10535161..10535703 | 146..688 | 100 | -> | Plus |
arm_2L | 10535767..10536315 | 689..1237 | 100 | | Plus |
BS32529.pep Sequence
Translation from 16 to 1236
> BS32529.pep
MLKSCHLNYCYGILISLFIFCDTASGDLIKVDKTILEDANLITPDLIKKY
GYPAETHKIQAKDGFVLTAHRIPKPGGQPVLLVHGLLDSSVAYVILGPER
SLGFLLSDMGYDVWLLNTRGNRYSRKHKRYHRYQPQFWDFSFHELGVYDL
PAAIDYVLARSKDFEQIHYVGHSQGTTSFFVMGSERSAYMKKIKLMQALA
PVVFWDYIDSPIILTFVKYLRPLVFIARSFGIYEFPPENEVWRSLIHKIC
SFVFQNTCTYFLMEAMGVDYAQFNSSLLPLFTGHASSGSSVKSLEHYGQQ
IHSGGFFKYNYYSTWENRRNHGVDTPPQYKLTNVDCKVALYYSRNDRLTS
DKDVVRLRDILPNVVLDYMFPDPLYNHINFIWGNDVKTVLNDRMIELMRK
VDNGEV*
BS32529.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18302-PA | 406 | CG18302-PA | 1..406 | 1..406 | 2178 | 100 | Plus |
Lip4-PA | 434 | CG6113-PA | 59..431 | 31..403 | 915 | 46.4 | Plus |
Lip4-PC | 448 | CG6113-PC | 73..445 | 31..403 | 915 | 46.4 | Plus |
Lip4-PB | 432 | CG6113-PB | 59..429 | 31..403 | 909 | 46.7 | Plus |
CG31871-PA | 531 | CG31871-PA | 71..439 | 35..403 | 881 | 45.8 | Plus |