BS32534.complete Sequence
1472 bp assembled on 2013-11-25
GenBank Submission: KX801852
> BS32534.complete
GAAGTTATCAGTCGACATGGCCAGTCATCGAATCATCCAATCTGTCATGT
ACGCCGGCAATTTCACCAGCTCAGAATCCGGTTGGCTAATTGGGCAGGAG
CACGGAATGCAGCATAGCGATGAGTGCATCTTCCAGAGACGAAGGCCCAC
AGTTGTGCTCTTTGTGCTCTACGGACTGGCCGTGCCCACCTTGTCGGCCT
TTGGACTGTGTACGAACTTTATCAACGCCGTGGTATTCATGCGTCCCAAG
ATGACGCCATCGGCCTTCAGTTACCTGGCGGCCCTTTCGTGGATGGACTG
CATCTCATGCCTGCTCATCACAATGACTGCCCTGTCCAGGAGCTATTTCT
ACAGCAGTCCCACATGGATTACCTACGACTATCAGTGGCAAACGCCACTC
TTTGGCATCAGCACTGGCGGAGCGAACCTGATTCTAGCGTGTCTGAGCCT
GGATAGATTCATCTATCTGTCCTGTTTTAAAAGGAACAACGGTGCTCCGC
GATTTTGTCGCCGAAAGGTGGCTCGCTGCATCATTGTTGTGGCAATAGGC
ATATCCATCGTGGTCAATATGCCATACTTTTTCGTCTTCTACGTGAGTGA
CTCGGGAACTTGTCACGTCACAGAATTCTACTACACAAATTTTTATAAAG
TTCAAAACTGGTTCACCTTCGCCTTGTTGGCCCTCCTCCCAGCCATATTT
CTGGTCATCGGCAATGGGGCCATTATTATAGCCTTCCGGAAATGGACGAA
GCAAAGTCGTATATGCCAGGCTAACAACCCCGCTGCTAATAGCCGCACCA
CTGCCAAGCGATATCAGCACCAAATGAAGTTGACCATCAGCATAGTGATT
GTGATTACATTGTACCTCTTCGGCGAACTTCCCGCACACATGACGTCCAG
AAAGAGCTCCTTAAACCTTTTATTCGGTGGTGATGCCAACAAGGTGGATG
ACTCCTTCATTGAGCAGCTGGAGGTGATCTGCATAACATTGAATGCACTG
CAGTTGTCCCTGAACATAGTTGTCTACGCCGTGATCAATCCATCGTTTAT
GCCGGAGTTTTTCCTGTGTCTTAAGGGAACCTCCGATGTGTGCTTCGGTT
TGTGTTGTTTCCGGGCTGTAAGAAGGACATGGAGACGCTGCCAGGACAAG
AGAAAGCAGAAGGCCACAGCAGAGGAGCGGGTGGTGAGCAGTGTGACTCC
ACAACATCTGCCACCAGATGAGGCATTGCCCTGCGGTTGCGAGAGTTGGG
CCAGTGACTCCAGCTGCAAAATCAATGCCCATTGCAAGACGGCAGTGGGA
ACATTCACCATGAAGGATTCCGAGCAGGACGAAGGAAGTCATAGCCACCA
TGAGTCAGAGGTTTTCTACACCAGATCTAGTGCCTGCCTGCACTCAAAGG
ATTCCGCACCAGACGAGGAATCCATATTCAGTTCTAGCTTTATAATTATA
ACTTAAAAGCTTTCTAGACCAT
BS32534.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:36:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15614-RA | 1410 | CG15614-PA | 1..1410 | 47..1456 | 7050 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15614-RA | 1524 | CG15614-RA | 13..1454 | 15..1456 | 7210 | 100 | Plus |
| CG34190-RA | 1100 | CG34190-RA | 394..1035 | 1456..815 | 3210 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16946520..16947161 | 815..1456 | 3210 | 100 | Plus |
| 2R | 25286936 | 2R | 16945567..16946191 | 15..639 | 3125 | 100 | Plus |
| 2R | 25286936 | 2R | 16946257..16946434 | 640..817 | 890 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 14:36:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 8163..8205 | 1139..1181 | 116 | 74.4 | Plus |
BS32534.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-11-25 14:14:02 Download gff for
BS32534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15614-RA | 15..1452 | 17..1454 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:18:03 Download gff for
BS32534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15614-RA | 15..1452 | 17..1454 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:18:03 Download gff for
BS32534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16945569..16946191 | 17..639 | 100 | -> | Plus |
| 2R | 16946257..16946434 | 640..817 | 100 | -> | Plus |
| 2R | 16946523..16947159 | 818..1454 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-11-25 14:14:02 Download gff for
BS32534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12833074..12833696 | 17..639 | 100 | -> | Plus |
| arm_2R | 12833762..12833939 | 640..817 | 100 | -> | Plus |
| arm_2R | 12834028..12834664 | 818..1454 | 100 | | Plus |
BS32534.pep Sequence
Translation from 16 to 1455
> BS32534.pep
MASHRIIQSVMYAGNFTSSESGWLIGQEHGMQHSDECIFQRRRPTVVLFV
LYGLAVPTLSAFGLCTNFINAVVFMRPKMTPSAFSYLAALSWMDCISCLL
ITMTALSRSYFYSSPTWITYDYQWQTPLFGISTGGANLILACLSLDRFIY
LSCFKRNNGAPRFCRRKVARCIIVVAIGISIVVNMPYFFVFYVSDSGTCH
VTEFYYTNFYKVQNWFTFALLALLPAIFLVIGNGAIIIAFRKWTKQSRIC
QANNPAANSRTTAKRYQHQMKLTISIVIVITLYLFGELPAHMTSRKSSLN
LLFGGDANKVDDSFIEQLEVICITLNALQLSLNIVVYAVINPSFMPEFFL
CLKGTSDVCFGLCCFRAVRRTWRRCQDKRKQKATAEERVVSSVTPQHLPP
DEALPCGCESWASDSSCKINAHCKTAVGTFTMKDSEQDEGSHSHHESEVF
YTRSSACLHSKDSAPDEESIFSSSFIIIT*
BS32534.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:46:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15614-PA | 469 | CG15614-PA | 1..469 | 11..479 | 2484 | 100 | Plus |
