BS32536.complete Sequence
974 bp assembled on 2013-09-16
GenBank Submission: KX804966
> BS32536.complete
GAAGTTATCAGTCGACATGAGCTCGGTACGACCACTGAATGCCGCGCTGC
AAGAGATTTGCATCAGGGAATTGAACGAGTTGCCCGCCCGTATGGCCCAG
GACATTGAGGCTCTGCGGGATTGGGTGCTGAAGCAGCCACATCTGCGGGC
CTGCACCGACGACCAGTTCCTGCTCGCCTTTCTGCGCGGCACCAAGTTCA
GTCTGGAGCGGGCCAAGGAGAAGTTCGATCGGTTCTACACGCTGCAACGA
TCCATTCCCGAGGTATTCAATGAGCGGCGCTTAGCTACCGATCCCCAGGT
GCTGGATATCGTAAGAATGGGAGTACTCCTTCAAATTCCCATGGATGCAG
ACGATCCGGGACCGCGGGTGACCATAATTCGCGCCGGTTCCTACGATACG
AGCAAACACAAGTTCCAGGACATCATTCGCGTGGGTTCCATGTTCGGTGA
GATCATGATGTTCGAGGACGACAACGCCACGGTCAGTGGCTATGTGGAGA
TAATGGACATGGCTGGCGTTACGGGGAGCCATCTCTTTGCCCTCCAGCCG
CAGTTGCTCAGTAAGTTCTCCACATACGCGGATGAGGCGATGCCGACCCG
CCAGAAGGGCATACACTTCATCAATGTTCCTGCGGCCTTTGAAACTGGAT
TCAATTCCCTGCGCTCCTTTTTCCCTGCCAAAATCAAGAGTCGGATCTCG
GTGAGCTCCGATCCGGCGGCCATATACGAGCTAGTGCGTCGCAAGTACTT
GCCCCAAGAATATGGAGGAACTGGTGGTAATCTGCAGGATATAAGCCACA
CCATGGAAGCGAAATTGTCCAGCTATGGGCCCTACTTTCGCGAAAGCCAA
AATTTCGGTGCCAATGACAAGTTGCGCGAGTTTGGAGACCATAAGCGAGG
GAACCATCGCTCCTCCTTTGGCGCTGTGGGGTCGTTTCGGAAACTGGAAA
TAGACTAAAAGCTTTCTAGACCAT
BS32536.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:56:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31636-RB | 942 | CG31636-PB | 1..942 | 17..958 | 4710 | 100 | Plus |
| CG31636-RA | 942 | CG31636-PA | 1..942 | 17..958 | 4710 | 100 | Plus |
| CG33965-RA | 954 | CG33965-PA | 99..626 | 100..627 | 660 | 75 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:56:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31636-RB | 1567 | CG31636-RB | 410..1363 | 12..965 | 4740 | 99.8 | Plus |
| CG31636-RA | 1294 | CG31636-RA | 137..1090 | 12..965 | 4740 | 99.8 | Plus |
| CG33965-RA | 1026 | CG33965-RA | 121..648 | 100..627 | 660 | 75 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:56:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6657003..6657376 | 694..321 | 1870 | 100 | Minus |
| 2L | 23513712 | 2L | 6657434..6657743 | 321..12 | 1535 | 99.7 | Minus |
| 2L | 23513712 | 2L | 6656663..6656934 | 965..694 | 1345 | 99.6 | Minus |
| 3L | 28110227 | 3L | 1233323..1233582 | 368..627 | 505 | 79.6 | Plus |
| 3L | 28110227 | 3L | 1233002..1233208 | 100..306 | 195 | 72.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:56:57 has no hits.
BS32536.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:02:26 Download gff for
BS32536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31636-RA | 142..1081 | 17..956 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:10 Download gff for
BS32536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31636-RA | 142..1081 | 17..956 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:10 Download gff for
BS32536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6657434..6657738 | 17..321 | 100 | | Minus |
| 2L | 6656672..6656933 | 695..956 | 100 | <- | Minus |
| 2L | 6657003..6657375 | 322..694 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:02:26 Download gff for
BS32536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6656672..6656933 | 695..956 | 100 | <- | Minus |
| arm_2L | 6657003..6657375 | 322..694 | 100 | <- | Minus |
| arm_2L | 6657434..6657738 | 17..321 | 100 | | Minus |
BS32536.pep Sequence
Translation from 16 to 957
> BS32536.pep
MSSVRPLNAALQEICIRELNELPARMAQDIEALRDWVLKQPHLRACTDDQ
FLLAFLRGTKFSLERAKEKFDRFYTLQRSIPEVFNERRLATDPQVLDIVR
MGVLLQIPMDADDPGPRVTIIRAGSYDTSKHKFQDIIRVGSMFGEIMMFE
DDNATVSGYVEIMDMAGVTGSHLFALQPQLLSKFSTYADEAMPTRQKGIH
FINVPAAFETGFNSLRSFFPAKIKSRISVSSDPAAIYELVRRKYLPQEYG
GTGGNLQDISHTMEAKLSSYGPYFRESQNFGANDKLREFGDHKRGNHRSS
FGAVGSFRKLEID*
BS32536.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31636-PB | 313 | CG31636-PB | 1..313 | 1..313 | 1612 | 100 | Plus |
| CG31636-PA | 313 | CG31636-PA | 1..313 | 1..313 | 1612 | 100 | Plus |
| CG33965-PA | 317 | CG33965-PA | 7..317 | 2..313 | 1088 | 67.3 | Plus |
| CG12926-PA | 313 | CG12926-PA | 7..313 | 2..313 | 656 | 42 | Plus |
| CG33966-PA | 310 | CG33966-PA | 1..310 | 1..313 | 649 | 40.4 | Plus |
