BS32537.complete Sequence
1595 bp assembled on 2013-11-09
GenBank Submission: KX804290
> BS32537.complete
GAAGTTATCAGTCGACATGTCCCTAGTGCGATTGATCGGAGCAGAGGCCC
GCCATCTGGCAAAGAGGTCCTACTCTTCAGCCGCTCCCACAACCAAGCTC
TTCATCGACGGCAAGTTCGTTGAGTCGAAGACGAACGAATGGATTGACGT
GCACGATCCGGCCACCAACCAAGTGGTCACCCGCGTGCCCAAGGCCACAC
AGGCGGAGATGCAGGCGGCCCTTGAGTCGAACAAGAAGGCTTTTCGCTCG
TGGAGCAACCAGTCGATCCTCACCCGCCAGCAGGTGATGTTCAAGCTGCA
GGCTCTCATCAAGGAGAACATGGGTGAGCTGGCCAAGAACATTACCAAGG
AGCAGGGCAAAACCTTGGCCGACGCAGAGGGCGACGTGCTCCGCGGCCTT
CAGGTGGTGGAACATTGCTGCAGCATCCCATCTCTGCAGATGGGCGAAAC
CGTAGCCAACGTGGCCAGGGACATGGATACGTACTCACTAGTGCTGCCCC
TCGGAGTAACCGCTGGCGTTGCGCCGTTCAATTTCCCGGCCATGATACCG
CTGTGGATGTTCCCGGTGGCCATCACCACCGGTAACACTATGCTGCTGAA
GCCATCGGAACGTGTGCCTGGTGCAACCATGTTGCTGATGGAGCTTCTTA
ACGAAGCTGGCTGTCCGCCGGGTGTCGTCAACGTAATCCATGGCCAACAT
GACGCTGTGAACTTCATCTGCGATGCTCCCGAAATTAAGGCAGTGTCCTT
TGTGGGCTCCGACCAGGCAGGCAAGTACATTTACGAGCGGGCTGGCAAGA
ATGGCAAGCGGGTGCAATCTAATATGGGCGCTAAGAACCACGGCATCATC
CTGGGCGATGCCAACAAGGAGAATACTTTGAACCAGTTGGCAGGTGCCGC
CTTTGGAGCTGCTGGTCAGCGTTGCATGGCATTGTCTACGGCTGTCTTTG
TCGGCGATGCCCAGGCATGGATTCCCGATCTGGTGGAGCGTGCCCAGAAG
CTGAAGGTAAATGCCGGCCATGTACCTGGAACTGACGTGGGTCCCGTGAT
CAGTGCCGCCTCACGCCAACGCATTAATGACCTGATTGAGTCTGGGGTCA
AGGAGGGAGCTAAGCTTATCCTGGACGGCAGGAAGATAACCGTGCCCGGA
TACGAGGATGGATACTTTGTGGGACCAACCATCCTAAGCGATGTTACGCC
CAGCATGAAGTGCTACACTGAGGAGATCTTTGGCCCTGTGTTGGTTATCC
TGAAGGCCGACACCTTGGACGATGCCATTGGCATTGTAAATGCCAATCCT
TATGGAAATGGTACCGCCGTATTCACCACCAATGGAGCGGCAGCCCGCAA
GTTTGTCAACGAAATTGATGCTGGTCAGGTTGGCGTGAATGTGCCAATTC
CCGTGCCCCTGCCCATGTTCTCCTTTACCGGAACTCGTGGCTCTTTCCGC
GGCGACCATCACTTCTATGGCAAACAGGGTATCAAATTCTACACCCAGAC
GAAGACGGTCACCCAGTTGTGGCGCAAAACGGATGTGACCCACACCCAGG
CGGCTGTGGCCATGCCCACCATGAAATAGAAGCTTTCTAGACCAT
BS32537.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:34:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17896-RB | 1563 | CG17896-PB | 1..1563 | 17..1579 | 7815 | 100 | Plus |
| CG17896-RA | 1536 | CG17896-PA | 3..1536 | 46..1579 | 7670 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:34:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17896-RB | 1950 | CG17896-RB | 79..1641 | 17..1579 | 7815 | 100 | Plus |
| CG17896-RA | 2123 | CG17896-RA | 281..1814 | 46..1579 | 7670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:34:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 491096..492630 | 1579..45 | 7675 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:34:10 has no hits.
BS32537.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-11-09 12:26:38 Download gff for
BS32537.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17896-RB | 78..1634 | 17..1573 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:17:16 Download gff for
BS32537.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17896-RB | 79..1635 | 17..1573 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:17:16 Download gff for
BS32537.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 491102..492628 | 47..1573 | 100 | <- | Minus |
| X | 493388..493417 | 17..46 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-11-09 12:26:38 Download gff for
BS32537.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 385135..386661 | 47..1573 | 100 | <- | Minus |
| arm_X | 387421..387450 | 17..46 | 100 | | Minus |
BS32537.pep Sequence
Translation from 16 to 1578
> BS32537.pep
MSLVRLIGAEARHLAKRSYSSAAPTTKLFIDGKFVESKTNEWIDVHDPAT
NQVVTRVPKATQAEMQAALESNKKAFRSWSNQSILTRQQVMFKLQALIKE
NMGELAKNITKEQGKTLADAEGDVLRGLQVVEHCCSIPSLQMGETVANVA
RDMDTYSLVLPLGVTAGVAPFNFPAMIPLWMFPVAITTGNTMLLKPSERV
PGATMLLMELLNEAGCPPGVVNVIHGQHDAVNFICDAPEIKAVSFVGSDQ
AGKYIYERAGKNGKRVQSNMGAKNHGIILGDANKENTLNQLAGAAFGAAG
QRCMALSTAVFVGDAQAWIPDLVERAQKLKVNAGHVPGTDVGPVISAASR
QRINDLIESGVKEGAKLILDGRKITVPGYEDGYFVGPTILSDVTPSMKCY
TEEIFGPVLVILKADTLDDAIGIVNANPYGNGTAVFTTNGAAARKFVNEI
DAGQVGVNVPIPVPLPMFSFTGTRGSFRGDHHFYGKQGIKFYTQTKTVTQ
LWRKTDVTHTQAAVAMPTMK*
BS32537.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17896-PB | 520 | CG17896-PB | 1..520 | 1..520 | 2681 | 100 | Plus |
| CG17896-PA | 511 | CG17896-PA | 2..511 | 11..520 | 2636 | 100 | Plus |
| CG31075-PA | 485 | CG31075-PA | 11..481 | 26..499 | 559 | 32.5 | Plus |
| CG31075-PB | 508 | CG31075-PB | 25..504 | 18..499 | 552 | 31.9 | Plus |
| Ssadh-PE | 509 | CG4685-PE | 24..501 | 21..498 | 510 | 27.6 | Plus |
