BS32538.complete Sequence
1442 bp assembled on 2013-09-16
GenBank Submission: KX802089
> BS32538.complete
GAAGTTATCAGTCGACATGGTGGCGGCCAAGTACGAGCGGCTGAATACCA
GTGGTGAGGCGGCCGGGAACGGAAATGGGAATGCCAGCGATGCAGAAGAC
GAGGAGATCGAACTCCATTTGGCGCAGAAGACGCAGCTGGGTAATGGCCA
TCGGTTGCGCCAGAGCAACTTCAAGTACGCCAGCGGAAAGTGCGGGTCCG
GAGAGGCGCCGTGCACCAACGAAACGGCCACGTTGGCCCAGGAGAACATG
ATGATGCAAATGGCCGTTGGTACACTGGCCATTATCTTCCTGTATCTGGC
ATTATCCATATCGCTGACATTCTACCAAACGGACATCAACCGGCAGATGC
CCTTTCCCCTGGCCATCGTAACCTATCATTTGGTTGTGAAGTTCCTTCTG
GCCGCCGCGGCGCGCAGAATCTACAGGATGCGAGTGGGCCGATCGCGGGT
TCAGTTGGATTGGAGGCTCGCCCTGCGGAAAATGGCACCCACGGGAGTTG
CCAGTGCCATCGACATTGGATTCTCCAACTGGGGCCTGGCCCTGGTGCCC
ATTTCCCTCTACACCATGACCAAGTCCTCGACCATTGTCTTCATCCTGCT
GTTCGCCATCGCTTTTGGACTGGAGAAGAAGAGCTGGTATCTGGTCTCGA
TTGTGGGCCTGATAGGCACTGGCCTTCTGATGTTCACCTACAAGTCAACG
GACTTCAATGCCCTTGGTTTCTTCTTCATCCTTTTCGCCTCGCTGAGCAG
CGGACTGCGATGGAGTTTCGCGCAGTTCATAATGCAGAAATCGAAGCTAG
GCTTGCACAATCCCATCGATATGATATATTACATGCAGCCGTGGATGATT
GCCTCGCTGGTGCCCCTCGTAATTGGAATCGAAGGTGCCGGGCTCATCGC
GGTAATAGAAGATCTGCACAACCACACTTCGAATGAGATAACTTGGGCCA
TTGCGAGGATATCAGCGGGCGCTTTGCTGGCTTTTCTCATGGAGTTCAGC
GAATTCTTGGTGCTCTGCAAGACCTCCAGTCTGACGCTCTCGATAGCCGG
CATTTTCAAGGATATCTGCCAGTTGGCACTAGCCGTGACTATCAGGAAGG
ACCACCTGAGTGTCATCAACTACATTGGCTTGATCATTTGCCTGGCTGGT
ATCGTTTGCCACCTACTGCACAAGTACTCCAATATGAAGGAGATGCAGCG
GCAGCAGGAGTTGCAGCTCGATAACGACCAGGAGGAGTCGTCGCCAGGGG
AGTACAAATTCAACGATGGCAGTGCCATTGTGGGTGTCCATGTGAAGTCG
CACTCCACGCTGACGGTGCCATTGCTGGAGCAAACCGACTCGGAGGACGA
GTCTGGTGCAAGCAACAAACAGAACGCCTCCGATGTGATCTTCGACGTGC
TGAAGCGACGCGACATGCAGCGATGAAAGCTTTCTAGACCAT
BS32538.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:57:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14971-RA | 1410 | CG14971-PA | 1..1410 | 17..1426 | 6945 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:57:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14971-RA | 2419 | CG14971-RA | 252..1665 | 17..1430 | 6965 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:57:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3470388..3471002 | 631..17 | 3000 | 99.2 | Minus |
| 3L | 28110227 | 3L | 3468777..3469324 | 1430..883 | 2710 | 99.6 | Minus |
| 3L | 28110227 | 3L | 3469381..3469637 | 886..630 | 1285 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:57:34 has no hits.
BS32538.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:02:41 Download gff for
BS32538.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14971-RA | 252..1660 | 17..1425 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:20 Download gff for
BS32538.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14971-RA | 252..1660 | 17..1425 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:20 Download gff for
BS32538.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3468782..3469322 | 885..1425 | 99 | <- | Minus |
| 3L | 3469383..3469635 | 632..884 | 100 | <- | Minus |
| 3L | 3470388..3471002 | 17..631 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:02:41 Download gff for
BS32538.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3468782..3469322 | 885..1425 | 99 | <- | Minus |
| arm_3L | 3469383..3469635 | 632..884 | 100 | <- | Minus |
| arm_3L | 3470388..3471002 | 17..631 | 99 | | Minus |
BS32538.pep Sequence
Translation from 16 to 1425
> BS32538.pep
MVAAKYERLNTSGEAAGNGNGNASDAEDEEIELHLAQKTQLGNGHRLRQS
NFKYASGKCGSGEAPCTNETATLAQENMMMQMAVGTLAIIFLYLALSISL
TFYQTDINRQMPFPLAIVTYHLVVKFLLAAAARRIYRMRVGRSRVQLDWR
LALRKMAPTGVASAIDIGFSNWGLALVPISLYTMTKSSTIVFILLFAIAF
GLEKKSWYLVSIVGLIGTGLLMFTYKSTDFNALGFFFILFASLSSGLRWS
FAQFIMQKSKLGLHNPIDMIYYMQPWMIASLVPLVIGIEGAGLIAVIEDL
HNHTSNEITWAIARISAGALLAFLMEFSEFLVLCKTSSLTLSIAGIFKDI
CQLALAVTIRKDHLSVINYIGLIICLAGIVCHLLHKYSNMKEMQRQQELQ
LDNDQEESSPGEYKFNDGSAIVGVHVKSHSTLTVPLLEQTDSEDESGASN
KQNASDVIFDVLKRRDMQR*
BS32538.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14971-PA | 469 | CG14971-PA | 1..469 | 1..469 | 2375 | 100 | Plus |
