BS32541.complete Sequence
1034 bp assembled on 2013-09-16
GenBank Submission: KX802161
> BS32541.complete
GAAGTTATCAGTCGACATGCAGTACTCCTATCTACTGGCAATCTGTGTCA
GCTTGCTGCTTCTGAAGCTGAAGGGAGCAGCTGCCACTTCTTTATCCGCC
GAACCGACTCCGGAACTTTTGAATGCGGCCAAGCAAATAGGTTTAGATGA
AGTTGGCTTGCGAGAAATGTGGCACAGCCAGCAGCCGCTGGTTATCAGAA
CTCAAAACGATGCTGGTCAAGTCACCACTTTGACCTATGAGTTAGGTCCG
GATTTCAGATCGATTTTAAGACGCAAGGTCTCAGAGGGAATACTGCCTGC
TAGGCTAGAGGATAATTCAGGCTCTAAGCCCCAGCAAGATTGGGAGTATG
TGCCGAGTGCCGGTCGTCAGTTCCGTCCCATTGGAGATTCCAACTTCGGT
ACAGGTAATTTCGAGACAAAGATATTTAGCACTGAATTTCCGAGATTTCC
GAATTGGGAGCTGCCAGCGGGAGTTACTCCGAAAGTTACAACCAAGACGG
AAACGGATAGCTCGGGACGCAAGGTGACCACCACAACTAGAACTTATAGC
GGCATTCTGGTCCCAGGCAGTAATGTATTCAAGCAGATATTCCCCGACAT
CTCCAGAGAGCCTGGTCCAATTAACACAGACTCAAACCATCCAGCCGAGA
ATCCTAACACCTCAGTCTTTTCCCCATCTCGTTCCCCATCTACTGGACCT
ATTGATTTCAACTATGTATATAATTCCCGACCAAGCCAAAGGGAACCCGT
CTTTGTGCCAGTGATTGACTCAACCACCACGCAGCGGACTTCAGTTCCCC
GGTTCAGTTCAGCATTACCAAGAGACGACGGATCAGATCGAGTCATAGAT
GATTATTTGAAACAAGTGAATCTGAGTGCCTCAGAAATTGAGAATTCGAA
TGGTGAAGTGGTCAAGACTATTGTGGATAAGAATGGCAGAATTCTAACTG
CCAGATTTGTTCTAAGCTCAGTCAAAGGAACCAACGAAGGATCTCAGCAG
CAGAGGCCGACCAAGTAAAAGCTTTCTAGACCAT
BS32541.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:57:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15293-RC | 1002 | CG15293-PC | 1..1002 | 17..1018 | 5010 | 100 | Plus |
| CG15293-RA | 1002 | CG15293-PA | 1..1002 | 17..1018 | 5010 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:57:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15293-RC | 1337 | CG15293-RC | 197..1199 | 17..1019 | 5015 | 100 | Plus |
| CG15293-RA | 1180 | CG15293-RA | 40..1042 | 17..1019 | 5015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:57:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14108195..14109142 | 1019..72 | 4740 | 100 | Minus |
| 2L | 23513712 | 2L | 14109194..14109251 | 74..17 | 290 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:57:38 has no hits.
BS32541.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:02:43 Download gff for
BS32541.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15293-RA | 54..1053 | 17..1016 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:21 Download gff for
BS32541.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15293-RA | 40..1039 | 17..1016 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:21 Download gff for
BS32541.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14108198..14109140 | 74..1016 | 100 | <- | Minus |
| 2L | 14109195..14109251 | 17..73 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:02:43 Download gff for
BS32541.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14108198..14109140 | 74..1016 | 100 | <- | Minus |
| arm_2L | 14109195..14109251 | 17..73 | 100 | | Minus |
BS32541.pep Sequence
Translation from 16 to 1017
> BS32541.pep
MQYSYLLAICVSLLLLKLKGAAATSLSAEPTPELLNAAKQIGLDEVGLRE
MWHSQQPLVIRTQNDAGQVTTLTYELGPDFRSILRRKVSEGILPARLEDN
SGSKPQQDWEYVPSAGRQFRPIGDSNFGTGNFETKIFSTEFPRFPNWELP
AGVTPKVTTKTETDSSGRKVTTTTRTYSGILVPGSNVFKQIFPDISREPG
PINTDSNHPAENPNTSVFSPSRSPSTGPIDFNYVYNSRPSQREPVFVPVI
DSTTTQRTSVPRFSSALPRDDGSDRVIDDYLKQVNLSASEIENSNGEVVK
TIVDKNGRILTARFVLSSVKGTNEGSQQQRPTK*
BS32541.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15293-PC | 333 | CG15293-PC | 1..333 | 1..333 | 1717 | 100 | Plus |
| CG15293-PA | 333 | CG15293-PA | 1..333 | 1..333 | 1717 | 100 | Plus |
| CG31769-PA | 311 | CG31769-PA | 1..295 | 1..318 | 226 | 26.2 | Plus |
