BS32543.complete Sequence
581 bp assembled on 2013-09-16
GenBank Submission: KX803029
> BS32543.complete
GAAGTTATCAGTCGACATGGTTTGGATTTGGAGCCTAATTGCACTCGGAA
TAGTTGTTGGCGCAACGGGGGAGAATGGGAGTAAACCGAATACCACCGAA
CCGACAACGACGGCGCCATCCTCACGAACTCCTGAAACAACTACTGTGAG
TCCCTACACTGCACTCGATAAGACAATAACCGATGATCTTCAGAATATTC
TAACCACATATGAGCGTGAATGCATTGGTAATTCTGAGTTCACACGTAAT
CTTGACCTCATACGCATCGCGGTAAAATGGGACCAGGGTCGTTTGAGAGA
AAAGATAGAAGCACGAAGAGACTTTGATGTGTACAATGAACAACGCATTT
TAATTGAACGACAAATTGATGAGCGCATAGAGGCCCTCAATAATATCCTG
CCTACCCAGGAACCGAATAGTTATTGCTCAGAATTTTACTTGAAGCAAAG
AGAAGCTCTTAGGAATGCTAAATCACTTTCGAATCAAGATAAATCAAACA
CTTTAATAATTAACAAAGCAATTTGCACTATCAATGATAATTATAATGAT
TATTTTCTTTACTAAAAGCTTTCTAGACCAT
BS32543.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:57:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43074-RA | 549 | CG43074-PA | 1..549 | 17..565 | 2745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:57:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43074-RA | 677 | CG43074-RA | 30..582 | 13..565 | 2765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:57:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3483927..3484380 | 565..112 | 2270 | 100 | Minus |
| 3L | 28110227 | 3L | 3484569..3484624 | 68..13 | 280 | 100 | Minus |
| 3L | 28110227 | 3L | 3484457..3484503 | 113..67 | 235 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 13:57:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blood | 7410 | blood BLOOD 7410bp | 5562..5677 | 431..545 | 127 | 61.3 | Plus |
BS32543.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:02:49 Download gff for
BS32543.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43074-RA | 34..580 | 17..563 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:26 Download gff for
BS32543.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43074-RA | 34..580 | 17..563 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:26 Download gff for
BS32543.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3483929..3484379 | 113..563 | 100 | <- | Minus |
| 3L | 3484458..3484502 | 68..112 | 100 | <- | Minus |
| 3L | 3484570..3484620 | 17..67 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:02:49 Download gff for
BS32543.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3483929..3484379 | 113..563 | 100 | <- | Minus |
| arm_3L | 3484458..3484502 | 68..112 | 100 | <- | Minus |
| arm_3L | 3484570..3484620 | 17..67 | 100 | | Minus |
BS32543.pep Sequence
Translation from 16 to 564
> BS32543.pep
MVWIWSLIALGIVVGATGENGSKPNTTEPTTTAPSSRTPETTTVSPYTAL
DKTITDDLQNILTTYERECIGNSEFTRNLDLIRIAVKWDQGRLREKIEAR
RDFDVYNEQRILIERQIDERIEALNNILPTQEPNSYCSEFYLKQREALRN
AKSLSNQDKSNTLIINKAICTINDNYNDYFLY*
BS32543.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43074-PA | 182 | CG43074-PA | 1..182 | 1..182 | 946 | 100 | Plus |
| CG43090-PA | 169 | CG43090-PA | 1..144 | 1..170 | 195 | 30.6 | Plus |
| CG17472-PA | 159 | CG17472-PA | 21..157 | 47..181 | 166 | 29.5 | Plus |
