BS32547.complete Sequence
326 bp assembled on 2013-09-16
GenBank Submission: KX804088
> BS32547.complete
GAAGTTATCAGTCGACATGAAGAAGCATTTGGAAGTGTTCTTGGTCGTGG
CATTAGCTGCTCTAGCGGAATTGCCAGGAGTTACAGCCTCGTCCGTGGAA
ATACTGTCCCATTGTGTCGCCTGTCCGGACGAATTTAGGGGCATGTTGGT
CTGCGCCTTTATCAACGGTTGCTACTTGGAAATAGAATACTGCTCCATGG
TGGTCTTCAACTGTGGACGCCAACAGCACCACAAACACTTGTTCCTAGTG
GTAAACGAGGGCAAGTGCAAGCCAGTTCGGGGCTACAAATGCGAGACCAT
GGATTTTTAAAAGCTTTCTAGACCAT
BS32547.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:57:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12828-RA | 294 | CG12828-PA | 1..294 | 17..310 | 1470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:57:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12828-RA | 448 | CG12828-RA | 41..334 | 17..310 | 1470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:57:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7149415..7149637 | 239..17 | 1115 | 100 | Minus |
2R | 25286936 | 2R | 7149288..7149358 | 310..240 | 355 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:57:24 has no hits.
BS32547.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:02:37 Download gff for
BS32547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12828-RA | 41..332 | 17..308 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:18 Download gff for
BS32547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12828-RA | 41..332 | 17..308 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:18 Download gff for
BS32547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7149290..7149358 | 240..308 | 100 | <- | Minus |
2R | 7149415..7149637 | 17..239 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:02:37 Download gff for
BS32547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3036795..3036863 | 240..308 | 100 | <- | Minus |
arm_2R | 3036920..3037142 | 17..239 | 100 | | Minus |
BS32547.pep Sequence
Translation from 16 to 309
> BS32547.pep
MKKHLEVFLVVALAALAELPGVTASSVEILSHCVACPDEFRGMLVCAFIN
GCYLEIEYCSMVVFNCGRQQHHKHLFLVVNEGKCKPVRGYKCETMDF*
BS32547.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12828-PA | 97 | CG12828-PA | 1..97 | 1..97 | 525 | 100 | Plus |