Clone BS32547 Report

Search the DGRC for BS32547

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:325
Well:47
Vector:pDNR-Dual
Associated Gene/TranscriptCG12828-RA
Protein status:BS32547.pep: full length peptide match
Sequenced Size:326

Clone Sequence Records

BS32547.complete Sequence

326 bp assembled on 2013-09-16

GenBank Submission: KX804088

> BS32547.complete
GAAGTTATCAGTCGACATGAAGAAGCATTTGGAAGTGTTCTTGGTCGTGG
CATTAGCTGCTCTAGCGGAATTGCCAGGAGTTACAGCCTCGTCCGTGGAA
ATACTGTCCCATTGTGTCGCCTGTCCGGACGAATTTAGGGGCATGTTGGT
CTGCGCCTTTATCAACGGTTGCTACTTGGAAATAGAATACTGCTCCATGG
TGGTCTTCAACTGTGGACGCCAACAGCACCACAAACACTTGTTCCTAGTG
GTAAACGAGGGCAAGTGCAAGCCAGTTCGGGGCTACAAATGCGAGACCAT
GGATTTTTAAAAGCTTTCTAGACCAT

BS32547.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:57:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG12828-RA 294 CG12828-PA 1..294 17..310 1470 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:57:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG12828-RA 448 CG12828-RA 41..334 17..310 1470 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:57:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7149415..7149637 239..17 1115 100 Minus
2R 25286936 2R 7149288..7149358 310..240 355 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:57:24 has no hits.

BS32547.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:02:37 Download gff for BS32547.complete
Subject Subject Range Query Range Percent Splice Strand
CG12828-RA 41..332 17..308 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:18 Download gff for BS32547.complete
Subject Subject Range Query Range Percent Splice Strand
CG12828-RA 41..332 17..308 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:18 Download gff for BS32547.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7149290..7149358 240..308 100 <- Minus
2R 7149415..7149637 17..239 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:02:37 Download gff for BS32547.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3036795..3036863 240..308 100 <- Minus
arm_2R 3036920..3037142 17..239 100   Minus

BS32547.pep Sequence

Translation from 16 to 309

> BS32547.pep
MKKHLEVFLVVALAALAELPGVTASSVEILSHCVACPDEFRGMLVCAFIN
GCYLEIEYCSMVVFNCGRQQHHKHLFLVVNEGKCKPVRGYKCETMDF*

BS32547.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG12828-PA 97 CG12828-PA 1..97 1..97 525 100 Plus